RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ZNF836Q6ZNA1 936 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 VTCN1Q7Z7D3 282 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 NR2C2APQ86WQ0 139 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 SCN4BQ8IWT1 228 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 MUC20Q8N307 709 aaPredicted RBP5.1□□□□□ -1.59
XRCC4-206ENST00000542685 FAM89BQ8N5H3 189 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 FAM71E2Q8N5Q1 922 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 OR4C5Q8NGB2 326 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 OR1P1Q8NH06 330 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 SPPL2AQ8TCT8 520 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 CASTOR1Q8WTX7 329 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 DNAJB3Q8WWF6 145 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 C11orf40Q8WZ69 217 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 NDRG1Q92597 394 aaKnown RBP5.1□□□□□ -1.59
XRCC4-206ENST00000542685 EXT2Q93063 718 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 ANKRD9Q96BM1 317 aaPredicted RBP5.1□□□□□ -1.59
XRCC4-206ENST00000542685 ZNF707Q96C28 371 aaPredicted RBP5.1□□□□□ -1.59
XRCC4-206ENST00000542685 PPCDCQ96CD2 204 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 HAVCR1Q96D42 359 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 CXorf40BQ96DE9 158 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 MS4A6EQ96DS6 147 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 C16orf58Q96GQ5 468 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 AKR1E2Q96JD6 320 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 AQP10Q96PS8 301 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 IMMP2LQ96T52 175 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 GPR21Q99679 349 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 MED10Q9BTT4 135 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 NMES1Q9C002 83 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 WDR13Q9H1Z4 485 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 P2RY12Q9H244 342 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 TMEM38AQ9H6F2 299 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 PDFQ9HBH1 243 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 LRTM1Q9HBL6 345 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 SLC35D1Q9NTN3 355 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 ACER3Q9NUN7 267 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 P4HTMQ9NXG6 502 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 SLC2A8Q9NY64 477 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 RNF24Q9Y225 148 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 ST3GAL6Q9Y274 331 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 SNX10Q9Y5X0 201 aa5.1□□□□□ -1.59
XRCC4-206ENST00000542685 TMEM235A6NFC5 223 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 MBD3L5A6NJ08 208 aaPredicted RBP5.09□□□□□ -1.59
XRCC4-206ENST00000542685 CCL25O15444 150 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 PRAMEF11O60813 436 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 RAMP3O60896 148 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 NDUFS3O75489 264 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 DIRAS1O95057 198 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 TNFRSF6BO95407 300 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 PDGFBP01127 241 aaPredicted RBP5.09□□□□□ -1.59
XRCC4-206ENST00000542685 IGLV3-27P01718 113 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 IGHEP01854 428 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 IFNW1P05000 195 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 CTSLP07711 333 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 TRGC1P0CF51 173 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 AKAIN1P0CW23 69 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 GIMD1P0DJR0 217 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 LIPCP11150 499 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 CELP19835 753 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 ANOS1P23352 680 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 GLRA1P23415 457 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 PSMB10P40306 273 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 NPY4RP50391 375 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 MVDP53602 400 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 CDK3Q00526 305 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 RBPJQ06330 500 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 MEF2DQ14814 521 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 ARL6IP1Q15041 203 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 SLC9A3R2Q15599 337 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 NSDHLQ15738 373 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 RPE65Q16518 533 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 TCTN1Q2MV58 587 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 ACOT6Q3I5F7 207 aaPredicted RBP5.09□□□□□ -1.59
XRCC4-206ENST00000542685 C2orf76Q3KRA6 126 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 CTSL3PQ5NE16 218 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 PLEKHS1Q5SXH7 462 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 PSRC1Q6PGN9 363 aaPredicted RBP5.09□□□□□ -1.59
XRCC4-206ENST00000542685 ZNF322Q6U7Q0 402 aaPredicted RBP5.09□□□□□ -1.59
XRCC4-206ENST00000542685 LRRC70Q7Z2Q7 622 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 SLC35E3Q7Z769 313 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 TGIF2LYQ8IUE0 185 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 C20orf196Q8IYI0 205 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 ZNF100Q8IYN0 542 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 HORMAD2Q8N7B1 307 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 TCEANCQ8N8B7 351 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 COX18Q8N8Q8 333 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 STEAP2Q8NFT2 490 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 OR51D1Q8NGF3 324 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 ZCCHC10Q8TBK6 192 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 SFXN5Q8TD22 340 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 ISOC2Q96AB3 205 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 KTI12Q96EK9 354 aaPredicted RBP5.09□□□□□ -1.59
XRCC4-206ENST00000542685 S100A16Q96FQ6 103 aaKnown RBP5.09□□□□□ -1.59
XRCC4-206ENST00000542685 PGAM5Q96HS1 289 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 PPP1R16AQ96I34 528 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 ZFP3Q96NJ6 502 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 IL4I1Q96RQ9 567 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 LYSMD1Q96S90 227 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 ATP6V0BQ99437 205 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 CTDSP1Q9GZU7 261 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 HRH4Q9H3N8 390 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms