RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 ADARB1P78563 741 aaKnown RBP16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 ATPAF1Q5TC12 328 aaPredicted RBP16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 TMEM244Q5VVB8 128 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 ZNF573Q86YE8 665 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 SYS1Q8N2H4 156 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 DHRSXQ8N5I4 330 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 OR52I1Q8NGK6 324 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 CYGBQ8WWM9 190 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 TMEM158Q8WZ71 300 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 AQP3Q92482 292 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 C10orf35Q96D05 121 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 SEH1LQ96EE3 360 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 C4orf36Q96KX1 117 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 NUDT16L1Q9BRJ7 211 aaKnown RBP16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 ZNF649Q9BS31 505 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 ALG8Q9BVK2 526 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 WDR13Q9H1Z4 485 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 OCEL1Q9H607 264 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 DCLRE1BQ9H816 532 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 DNAJB11Q9UBS4 358 aa16.69■□□□□ 0.26
CACNA2D4-215ENST00000542340 A0A0A6YYJ9 748 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 LOC107986453A0A1B0GWG9 222 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 PQLC2LA1A4F0 135 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 A6NIN4 97 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 DVL1O14640 695 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 CLIC3O95833 236 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 ISG15P05161 165 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 HTR1AP08908 422 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 NANOS3P60323 173 aaKnown RBP16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 SMN1Q16637 294 aaKnown RBP16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 STUMQ69YW2 141 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 HAGHLQ6PII5 290 aaPredicted RBP16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 SLC36A1Q7Z2H8 476 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 RDH10Q8IZV5 341 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 SETD9Q8NE22 299 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 CCL13Q99616 98 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 DNTTIP1Q9H147 329 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 RASSF4Q9H2L5 321 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 SMURF1Q9HCE7 757 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 ERVK13-1Q9NX77 482 aa16.68■□□□□ 0.26
CACNA2D4-215ENST00000542340 RNF212BA8MTL3 300 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 C22orf46C9J442 243 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 H3BSH0 61 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 ENSAO43768 121 aaKnown RBP16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 ECDO95905 644 aaPredicted RBP16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 LIPFP07098 398 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 GLRA1P23415 457 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 HAAOP46952 286 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 TGM4P49221 684 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 GMFBP60983 142 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 ELF3P78545 371 aaPredicted RBP16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 IL18R1Q13478 541 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 ARMCX4Q5H9R4 360 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 OR5T2Q8NGG2 359 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 JAM3Q9BX67 310 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 CHST5Q9GZS9 411 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 FGF20Q9NP95 211 aaPredicted RBP16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 RASL12Q9NYN1 266 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 SLC7A11Q9UPY5 501 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 HSPE1-MOB4S4R3N1 261 aa16.67■□□□□ 0.26
CACNA2D4-215ENST00000542340 J3QT63 122 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 FCN3O75636 299 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 GATBO75879 557 aaKnown RBP16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 SERPINA3P01011 423 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 AMY2BP19961 511 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 MRPL28Q13084 256 aaKnown RBP16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 ALKBH1Q13686 389 aaKnown RBP16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 UBE2V2Q15819 145 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 ANGPTL6Q8NI99 470 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 CNIH3Q8TBE1 160 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 HAVCR2Q8TDQ0 301 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 ZNF418Q8TF45 676 aaPredicted RBP16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 PP6455Q8WZ26 134 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 TMIGD2Q96BF3 282 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 UPRTQ96BW1 309 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 MED30Q96HR3 178 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 ISG20L2Q9H9L3 353 aaKnown RBP16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 SNTG1Q9NSN8 517 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 NLKQ9UBE8 527 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 NUP50Q9UKX7 468 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 POLDIP2Q9Y2S7 368 aa16.66■□□□□ 0.26
CACNA2D4-215ENST00000542340 IRGMA1A4Y4 181 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 OR4C45A6NMZ5 311 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 OR2AT4A6NND4 320 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 H0YAE9 185 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 GPR37O15354 613 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 NDUFB3O43676 98 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 NOS1APO75052 506 aaPredicted RBP16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 FPR2P25090 351 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 KLF17Q5JT82 389 aaPredicted RBP16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 ZNF788Q6ZQV5 615 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 USP43Q70EL4 1123 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 BTN2A1Q7KYR7 527 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 FAM216BQ8N7L0 139 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 PNLDC1Q8NA58 520 aaKnown RBP16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 POC1AQ8NBT0 407 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 VCXQ9H320 206 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 HHLA2Q9UM44 414 aa16.65■□□□□ 0.26
CACNA2D4-215ENST00000542340 A0A1B0GW55 424 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 NKX6-3A6NJ46 265 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms