RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ARL11Q969Q4 196 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 ZBTB8AQ96BR9 441 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 OR51M1Q9H341 326 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 HDGFL3Q9Y3E1 203 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 LOC102723996A0A087X1L8 192 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 COLCA2A8K830 154 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 ZNF705EA8MWA4 302 aaPredicted RBP12.94□□□□□ -0.34
DDX55-209ENST00000542286 FGF16O43320 207 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 TRAPPC6AO75865 159 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 BPNT1O95861 308 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 TDGF1P13385 188 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 HGFACQ04756 655 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 IL11RAQ14626 422 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 PEA15Q15121 130 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 ZNF529Q6P280 563 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 BHLHE23Q8NDY6 225 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 OR9K2Q8NGE7 335 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 OR4A4PQ8NGN8 299 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 SEC11CQ9BY50 192 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 UQCC1Q9NVA1 299 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 PLEK2Q9NYT0 353 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 UPB1Q9UBR1 384 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 C13orf42A0A1B0GVH6 325 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 C5orf52A6NGY3 159 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 ANGPTL7O43827 346 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 S100A6P06703 90 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 BRICD5Q6PL45 260 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 OPN5Q6U736 354 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 TIPARPQ7Z3E1 657 aaKnown RBP12.94□□□□□ -0.34
DDX55-209ENST00000542286 OR2Y1Q8NGV0 311 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 OR14K1Q8NGZ2 314 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 OR4K15Q8NH41 348 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 EDARADDQ8WWZ3 215 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 NABP1Q96AH0 204 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 RAB3CQ96E17 227 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 CPNE2Q96FN4 548 aaPredicted RBP12.94□□□□□ -0.34
DDX55-209ENST00000542286 HDHD3Q9BSH5 251 aaPredicted RBP12.94□□□□□ -0.34
DDX55-209ENST00000542286 TMEM59Q9BXS4 323 aa12.94□□□□□ -0.34
DDX55-209ENST00000542286 PCSK5Q92824 1860 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 PINLYPA6NC86 204 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 NTN3O00634 580 aaPredicted RBP12.93□□□□□ -0.34
DDX55-209ENST00000542286 FARS2O95363 451 aaKnown RBP12.93□□□□□ -0.34
DDX55-209ENST00000542286 S100PP25815 95 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 SUCLG1P53597 346 aaKnown RBP12.93□□□□□ -0.34
DDX55-209ENST00000542286 IL13RA1P78552 427 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 EIF2S3LQ2VIR3 472 aaKnown RBP12.93□□□□□ -0.34
DDX55-209ENST00000542286 WIPI1Q5MNZ9 446 aaPredicted RBP12.93□□□□□ -0.34
DDX55-209ENST00000542286 FOXRED1Q96CU9 486 aaPredicted RBP12.93□□□□□ -0.34
DDX55-209ENST00000542286 ONECUT2O95948 504 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 B4GALT1P15291 398 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 RAB6AP20340 208 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 MSR1P21757 451 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 ZFP36L1Q07352 338 aaKnown RBP12.93□□□□□ -0.34
DDX55-209ENST00000542286 PDCD1Q15116 288 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 SLC9A3R2Q15599 337 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 KISS1Q15726 138 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 C9orf135Q5VTT2 229 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 C20orf196Q8IYI0 205 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 INO80EQ8NBZ0 244 aaPredicted RBP12.93□□□□□ -0.34
DDX55-209ENST00000542286 OR5AP2Q8NGF4 316 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 AKR7LQ8NHP1 331 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 SLC25A21Q9BQT8 299 aaPredicted RBP12.93□□□□□ -0.34
DDX55-209ENST00000542286 ANGPTL4Q9BY76 406 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 ULBP2Q9BZM5 246 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 ZNF700Q9H0M5 742 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 WDR54Q9H977 334 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 GPR173Q9NS66 373 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 DEPPQ9NTK1 212 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 PIGLQ9Y2B2 252 aa12.93□□□□□ -0.34
DDX55-209ENST00000542286 CD79AP11912 226 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 TCN2P20062 427 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 FOLR3P41439 243 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 CHAF1BQ13112 559 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 ARFRP1Q13795 201 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 RBM39Q14498 530 aaKnown RBP12.92□□□□□ -0.34
DDX55-209ENST00000542286 CDCP2Q5VXM1 449 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 ZNF774Q6NX45 483 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 OR51T1Q8NGJ9 327 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 OR14L1PQ8NHC6 308 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 FGFBP3Q8TAT2 258 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 SLC25A43Q8WUT9 341 aaPredicted RBP12.92□□□□□ -0.34
DDX55-209ENST00000542286 ZNF845Q96IR2 970 aaPredicted RBP12.92□□□□□ -0.34
DDX55-209ENST00000542286 EDEM2Q9BV94 578 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 CRLF2Q9HC73 371 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 FAM96BQ9Y3D0 163 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 IGKV1D-8A0A087WSZ0 117 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 CCDC187A0A096LP49 1063 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 UBE2CO00762 179 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 DHHO43323 396 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 GATCO43716 136 aaKnown RBP12.92□□□□□ -0.34
DDX55-209ENST00000542286 CXCL13O43927 109 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 IFNA6P05013 189 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 FCGR2AP12318 317 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 ZBTB25P24278 435 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 PTAFRP25105 342 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 ACKR3P25106 362 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 GUCA1AP43080 201 aaPredicted RBP12.92□□□□□ -0.34
DDX55-209ENST00000542286 SLC23A3Q6PIS1 610 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 TMEM123Q8N131 208 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 DYRK2Q92630 601 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms