RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 TECTBQ96PL2 329 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 C1QTNF5Q9BXJ0 243 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 UBQLN2Q9UHD9 624 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 SLC7A11Q9UPY5 501 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 FREM2Q5SZK8 3169 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 FXYD6-FXYD2A0A087WZ82 144 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 ZNF816-ZNF321PA0A0X1KG74 233 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 C9orf170A2RU37 121 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 HTR3BO95264 441 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 EDN3P14138 238 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 IL13RA1P78552 427 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 IKZF1Q13422 519 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 EXOSC2Q13868 293 aaKnown RBP9.41□□□□□ -0.9
NECAP1-206ENST00000542095 ZNF766Q5HY98 468 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 LY6G6FQ5SQ64 297 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 C9orf135Q5VTT2 229 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 TMEM17Q86X19 198 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 TMEM178AQ8NBL3 297 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 CPEB3Q8NE35 698 aaKnown RBP9.41□□□□□ -0.9
NECAP1-206ENST00000542095 SPSB4Q96A44 273 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 SCGB3A2Q96PL1 93 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 PHB2Q99623 299 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 ST6GALNAC5Q9BVH7 336 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 FXYD6Q9H0Q3 95 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 LDAHQ9H6V9 325 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 KCNN3Q9UGI6 736 aa9.41□□□□□ -0.9
NECAP1-206ENST00000542095 CDRT15L2A8MXV6 281 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 ARPC5O15511 151 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 NOS1APO75052 506 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-206ENST00000542095 FTH1P19P0C7X4 201 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 COX5BP10606 129 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 GABRR1P24046 479 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 OR3A3P47888 321 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 OR3A2P47893 321 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 FUT6P51993 359 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 ATP1B3P54709 279 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 SNU13P55769 128 aaKnown RBP9.4□□□□□ -0.9
NECAP1-206ENST00000542095 SOX8P57073 446 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 FGL1Q08830 312 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 TGIF1Q15583 401 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 C3AR1Q16581 482 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 CSNK2A3Q8NEV1 391 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 MARCH1Q8TCQ1 289 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 MITD1Q8WV92 249 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 PARD6AQ9NPB6 346 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 PLEKHJ1Q9NW61 149 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 MAB21L2Q9Y586 359 aa9.4□□□□□ -0.9
NECAP1-206ENST00000542095 IGKV1-27A0A075B6S5 117 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 A0A096LPE4 126 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 A0A1W2PPZ6 126 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 RFPL4AA6NLU0 287 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 RFPL4AL1F8VTS6 287 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 EFSO43281 561 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 SPRY1O43609 319 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-206ENST00000542095 SERPINA5P05154 406 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 AKR1C4P17516 323 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 S100A11P31949 105 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 PRSS12P56730 875 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 SORDQ00796 357 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 SRSF4Q08170 494 aaKnown RBP9.39□□□□□ -0.91
NECAP1-206ENST00000542095 PLCXD3Q63HM9 321 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 ASCL4Q6XD76 172 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 COLCA1Q6ZS62 124 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 MOB3CQ70IA8 216 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 ADAD2Q8NCV1 583 aaKnown RBP9.39□□□□□ -0.91
NECAP1-206ENST00000542095 PDCD10Q9BUL8 212 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 FN3KRPQ9HA64 309 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 LIPGQ9Y5X9 500 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 CEACAM18A8MTB9 384 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 ANGPTL7O43827 346 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 PLATP00750 562 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 CD8AP01732 235 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 PPP3CBP16298 524 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 HLA-GP17693 338 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 VAMP1P23763 118 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 NKAPLQ5M9Q1 402 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 C6orf201Q7Z4U5 140 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 PIGCQ92535 297 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 IRF2BPLQ9H1B7 796 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 DEFB127Q9H1M4 99 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 PCDHB16Q9NRJ7 776 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 COMMD9Q9P000 198 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 GPR132Q9UNW8 380 aa9.39□□□□□ -0.91
NECAP1-206ENST00000542095 TRGV5A0A0B4J1U4 118 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 SPAARA0A1B0GVQ0 90 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 DUS4LO95620 317 aaKnown RBP9.38□□□□□ -0.91
NECAP1-206ENST00000542095 HLA-HP01893 362 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 FPR2P25090 351 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 AGTR1P30556 359 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 ARR3P36575 388 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 NUBP1P53384 320 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 RAB14P61106 215 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 CHRFAM7AQ494W8 412 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 C3P1Q6ZMU1 363 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 TMUB2Q71RG4 321 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 NUFIP2Q7Z417 695 aaKnown RBP9.38□□□□□ -0.91
NECAP1-206ENST00000542095 PXT1Q8NFP0 134 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 OR5AP2Q8NGF4 316 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 CASTOR1Q8WTX7 329 aa9.38□□□□□ -0.91
NECAP1-206ENST00000542095 EMG1Q92979 244 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms