RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TSPAN15O95858 294 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 SMAD4Q13485 552 aaKnown RBP13.48□□□□□ -0.25
CNOT9-208ENST00000542068 HABP2Q14520 560 aaPredicted RBP13.48□□□□□ -0.25
CNOT9-208ENST00000542068 FAHD2BQ6P2I3 314 aaPredicted RBP13.48□□□□□ -0.25
CNOT9-208ENST00000542068 HSD17B11Q8NBQ5 300 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 MRPL24Q96A35 216 aaKnown RBP13.48□□□□□ -0.25
CNOT9-208ENST00000542068 PTX4Q96A99 478 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 FAHD2AQ96GK7 314 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 ZNF2Q9BSG1 426 aaPredicted RBP13.48□□□□□ -0.25
CNOT9-208ENST00000542068 RAB18Q9NP72 206 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 ZNF581Q9P0T4 197 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 KLF2Q9Y5W3 355 aaPredicted RBP13.48□□□□□ -0.25
CNOT9-208ENST00000542068 ZNF814B7Z6K7 855 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 ADAM10O14672 748 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 ANGPTL7O43827 346 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 FCGR2AP12318 317 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 PTGER4P35408 488 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 CLDN17P56750 224 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 TMEM33P57088 247 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 OGFOD3Q6PK18 319 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 ADAMTS17Q8TE56 1095 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 UQCC2Q9BRT2 126 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 URM1Q9BTM9 101 aaKnown RBP13.48□□□□□ -0.25
CNOT9-208ENST00000542068 SPACA1Q9HBV2 294 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 ZNF107Q9UII5 783 aaPredicted RBP13.48□□□□□ -0.25
CNOT9-208ENST00000542068 SRPK3Q9UPE1 567 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 FBXO7Q9Y3I1 522 aa13.48□□□□□ -0.25
CNOT9-208ENST00000542068 COLCA2A8K830 154 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 EFNA2O43921 213 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 CHRM2P08172 466 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 H2AFB1P0C5Y9 115 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 OR13C7P0DN81 318 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 GABREP78334 506 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 IGSF11Q5DX21 431 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 AADACL3Q5VUY0 350 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 PEG10Q86TG7 708 aaKnown RBP13.47□□□□□ -0.25
CNOT9-208ENST00000542068 CADM4Q8NFZ8 388 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 ERGIC1Q969X5 290 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 RGCCQ9H4X1 137 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 B3GALT5Q9Y2C3 310 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 RCL1Q9Y2P8 373 aaKnown RBP13.47□□□□□ -0.25
CNOT9-208ENST00000542068 PTRH2Q9Y3E5 179 aaKnown RBP13.47□□□□□ -0.25
CNOT9-208ENST00000542068 WIF1Q9Y5W5 379 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 A0A1W2PQM1 296 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 PATE3B3GLJ2 98 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 QDPRP09417 244 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 HKR1P10072 659 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 NQO2P16083 231 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 MIDNQ504T8 468 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 PHLDA2Q53GA4 152 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 IL34Q6ZMJ4 242 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 OR56B1Q8NGI3 324 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 FNDC9Q8TBE3 224 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 CCDC74BQ96LY2 380 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 RAB33BQ9H082 229 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 SMOC1Q9H4F8 434 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 RFNGQ9Y644 331 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 IGKV1-9A0A0C4DH69 117 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 ZFAND5O76080 213 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 ZNF708P17019 499 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 EIF2S3LQ2VIR3 472 aaKnown RBP13.47□□□□□ -0.25
CNOT9-208ENST00000542068 FAM24BQ8N5W8 94 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 POC1AQ8NBT0 407 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 SMCO4Q9NRQ5 59 aa13.47□□□□□ -0.25
CNOT9-208ENST00000542068 HPNP05981 417 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 TMEM225BP0DP42 221 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 FPR2P25090 351 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 FABP9Q0Z7S8 132 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 LYSMD4Q5XG99 296 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 CPEB2Q7Z5Q1 589 aaKnown RBP13.46□□□□□ -0.25
CNOT9-208ENST00000542068 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.46□□□□□ -0.25
CNOT9-208ENST00000542068 MYOTQ9UBF9 498 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 NXT1Q9UKK6 140 aaKnown RBP13.46□□□□□ -0.25
CNOT9-208ENST00000542068 GALNSP34059 522 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 NAAAQ02083 359 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 KISS1Q15726 138 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 AWAT1Q58HT5 328 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 RHBDD2Q6NTF9 364 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 Q7L0L9 218 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 SULF2Q8IWU5 870 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 ARRDC1Q8N5I2 433 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 OR5L2Q8NGL0 311 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 PLEKHJ1Q9NW61 149 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 SIT1Q9Y3P8 196 aa13.46□□□□□ -0.25
CNOT9-208ENST00000542068 DHRS7CA6NNS2 312 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 NOVA1P51513 510 aaKnown RBP13.45□□□□□ -0.26
CNOT9-208ENST00000542068 SPEM2Q0P670 501 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 EIF5AL1Q6IS14 154 aaKnown RBP13.45□□□□□ -0.26
CNOT9-208ENST00000542068 SHDQ96IW2 340 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 SPSB2Q99619 263 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 TRBV6-7A0A0A0MS04 114 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 A0A1W2PQD3 144 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 PMS2P1A4D2B8 440 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 ANKUB1A6NFN9 424 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 IGHG1P01857 330 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 DBHP09172 617 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 GSTP1P09211 210 aaKnown RBP13.45□□□□□ -0.26
CNOT9-208ENST00000542068 ZNF44P15621 663 aa13.45□□□□□ -0.26
CNOT9-208ENST00000542068 APOBEC1P41238 236 aaKnown RBP13.45□□□□□ -0.26
CNOT9-208ENST00000542068 MFSD8Q8NHS3 518 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms