RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 RAD52P43351 418 aa23.77■■□□□ 1.4
CCM2-218ENST00000541586 PITPNAQ00169 270 aa23.77■■□□□ 1.4
CCM2-218ENST00000541586 PRDX4Q13162 271 aa23.77■■□□□ 1.4
CCM2-218ENST00000541586 UNC119Q13432 240 aa23.77■■□□□ 1.4
CCM2-218ENST00000541586 TMEM69Q5SWH9 247 aa23.77■■□□□ 1.4
CCM2-218ENST00000541586 CRYBG3Q68DQ2 2970 aa23.77■■□□□ 1.4
CCM2-218ENST00000541586 OR2T2Q6IF00 324 aa23.77■■□□□ 1.4
CCM2-218ENST00000541586 CMBLQ96DG6 245 aa23.77■■□□□ 1.4
CCM2-218ENST00000541586 BORCS8Q96FH0 119 aa23.77■■□□□ 1.4
CCM2-218ENST00000541586 SLC7A11Q9UPY5 501 aa23.77■■□□□ 1.4
CCM2-218ENST00000541586 A0A1W2PQ09 198 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 PLAUP00749 431 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 RAB6AP20340 208 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 RANBP1P43487 201 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 RBP2P50120 134 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 FUT6P51993 359 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 UNQ6126/PRO20091Q6UXV3 157 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 LHFPL2Q6ZUX7 228 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 TNFAIP8L1Q8WVP5 186 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 ATG5Q9H1Y0 275 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 RABL2AQ9UBK7 228 aaPredicted RBP23.76■■□□□ 1.39
CCM2-218ENST00000541586 RAB22AQ9UL26 194 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 RABL2BQ9UNT1 228 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 NBPF19A0A087WUL8 3843 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 LILRA1O75019 489 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 NAT2P11245 290 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 PTH2RP49190 550 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 C1QL2Q7Z5L3 287 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 FAM46BQ96A09 425 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 CPNE2Q96FN4 548 aaPredicted RBP23.76■■□□□ 1.39
CCM2-218ENST00000541586 FBLN5Q9UBX5 448 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 POU2F3Q9UKI9 436 aa23.76■■□□□ 1.39
CCM2-218ENST00000541586 TMEM14DPA8MWL7 114 aa23.75■■□□□ 1.39
CCM2-218ENST00000541586 XRCC3O43542 346 aa23.75■■□□□ 1.39
CCM2-218ENST00000541586 KDM4BO94953 1096 aa23.75■■□□□ 1.39
CCM2-218ENST00000541586 ALDH3B1P43353 468 aa23.75■■□□□ 1.39
CCM2-218ENST00000541586 ZP1P60852 638 aa23.75■■□□□ 1.39
CCM2-218ENST00000541586 ABCA4P78363 2273 aa23.75■■□□□ 1.39
CCM2-218ENST00000541586 ZNF787Q6DD87 383 aa23.75■■□□□ 1.39
CCM2-218ENST00000541586 GAL3ST1Q99999 423 aa23.75■■□□□ 1.39
CCM2-218ENST00000541586 DIABLOQ9NR28 239 aa23.75■■□□□ 1.39
CCM2-218ENST00000541586 ATP6V1G2-DDX39BF2Z307 99 aa23.74■■□□□ 1.39
CCM2-218ENST00000541586 HLA-DQB1P01920 261 aa23.74■■□□□ 1.39
CCM2-218ENST00000541586 UBBP0CG47 229 aa23.74■■□□□ 1.39
CCM2-218ENST00000541586 RAC2P15153 192 aa23.74■■□□□ 1.39
CCM2-218ENST00000541586 MMP15P51511 669 aa23.74■■□□□ 1.39
CCM2-218ENST00000541586 TAS2R20P59543 309 aa23.74■■□□□ 1.39
CCM2-218ENST00000541586 ZDHHC23Q8IYP9 409 aa23.74■■□□□ 1.39
CCM2-218ENST00000541586 MARS2Q96GW9 593 aaKnown RBP23.74■■□□□ 1.39
CCM2-218ENST00000541586 BCL2L14Q9BZR8 327 aa23.74■■□□□ 1.39
CCM2-218ENST00000541586 RNF115Q9Y4L5 304 aa23.74■■□□□ 1.39
CCM2-218ENST00000541586 ANKRD30BLA7E2S9 258 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 LOXP28300 417 aaPredicted RBP23.73■■□□□ 1.39
CCM2-218ENST00000541586 MNDAP41218 407 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 SCN1BQ07699 218 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 TRIQKQ629K1 86 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 OR2W3Q7Z3T1 314 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 POC5Q8NA72 575 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 KLF14Q8TD94 323 aaPredicted RBP23.73■■□□□ 1.39
CCM2-218ENST00000541586 MARVELD3Q96A59 401 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 PHF21AQ96BD5 680 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 GHRLQ9UBU3 117 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 TBC1D24Q9ULP9 559 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 ING4Q9UNL4 249 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 ATP23Q9Y6H3 246 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 CTDSPLO15194 276 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 TUBG1P23258 451 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 ATP1B3P54709 279 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 CEACAM21Q3KPI0 293 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 ZNF295-AS1Q8N0V1 137 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 TMEM104Q8NE00 496 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 KCNG3Q8TAE7 436 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 HPSE2Q8WWQ2 592 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 NEUROG1Q92886 237 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 THAP7Q9BT49 309 aaPredicted RBP23.73■■□□□ 1.39
CCM2-218ENST00000541586 TUBG2Q9NRH3 451 aa23.73■■□□□ 1.39
CCM2-218ENST00000541586 DCHS2Q6V1P9 2916 aa23.72■■□□□ 1.39
CCM2-218ENST00000541586 MPV17P39210 176 aa23.72■■□□□ 1.39
CCM2-218ENST00000541586 DGCR2P98153 550 aa23.72■■□□□ 1.39
CCM2-218ENST00000541586 PSG7Q13046 419 aa23.72■■□□□ 1.39
CCM2-218ENST00000541586 SLC22A6Q4U2R8 563 aa23.72■■□□□ 1.39
CCM2-218ENST00000541586 CHPT1Q8WUD6 406 aa23.72■■□□□ 1.39
CCM2-218ENST00000541586 DVL3Q92997 716 aaPredicted RBP23.72■■□□□ 1.39
CCM2-218ENST00000541586 FGF23Q9GZV9 251 aaPredicted RBP23.72■■□□□ 1.39
CCM2-218ENST00000541586 LANCL1O43813 399 aa23.71■■□□□ 1.39
CCM2-218ENST00000541586 TPPPO94811 219 aa23.71■■□□□ 1.39
CCM2-218ENST00000541586 TMEM225BP0DP42 221 aa23.71■■□□□ 1.39
CCM2-218ENST00000541586 TLE4Q04727 773 aa23.71■■□□□ 1.39
CCM2-218ENST00000541586 VHLLQ6RSH7 139 aa23.71■■□□□ 1.39
CCM2-218ENST00000541586 TMEM200AQ86VY9 491 aa23.71■■□□□ 1.39
CCM2-218ENST00000541586 S100A13Q99584 98 aa23.71■■□□□ 1.39
CCM2-218ENST00000541586 MRPL15Q9P015 296 aaKnown RBP23.71■■□□□ 1.39
CCM2-218ENST00000541586 MPC1Q9Y5U8 109 aa23.71■■□□□ 1.39
CCM2-218ENST00000541586 A0A1B0GVG6 124 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 A0A1W2PP11 408 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 PQLC2LA1A4F0 135 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 METTL21EPA6NDL7 271 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 SHISA9B4DS77 424 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 CDC14BO60729 498 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 DEFA1P59665 94 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms