RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 TMEM176BQ3YBM2 270 aaPredicted RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 OR52E8Q6IFG1 317 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 CYHR1Q6ZMK1 362 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 Q6ZTK2 550 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 GDPD3Q7L5L3 318 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 PRSS48Q7RTY5 328 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 LYG2Q86SG7 212 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 LACC1Q8IV20 430 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 NAXDQ8IW45 347 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 PRELID2Q8N945 189 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 ZNF383Q8NA42 475 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 TSTD1Q8NFU3 115 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 OR2A12Q8NGT7 310 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 OR9A4Q8NGU2 314 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 PYROXD1Q8WU10 500 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 TFB1MQ8WVM0 346 aaKnown RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 TCTEX1D2Q8WW35 142 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 FLYWCH2Q96CP2 140 aaKnown RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 RAB3CQ96E17 227 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 FBXO17Q96EF6 278 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 WBP1Q96G27 269 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 VAT1Q99536 393 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 AGMATQ9BSE5 352 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 CCDC90BQ9GZT6 254 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 CSTL1Q9H114 145 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 TMEM38AQ9H6F2 299 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 TMBIM4Q9HC24 238 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 EML4Q9HC35 981 aaKnown RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 ESM1Q9NQ30 184 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 COA4Q9NYJ1 87 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 ELOVL5Q9NYP7 299 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 TMEM9Q9P0T7 183 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 SNX12Q9UMY4 172 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 TP53TG5Q9Y2B4 290 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 RPL36Q9Y3U8 105 aaKnown RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 TESMINQ9Y4I5 508 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 HS3ST3B1Q9Y662 390 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 PTPRZ1P23471 2315 aaPredicted RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 GOLGA4Q13439 2230 aaKnown RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 PIKFYVEQ9Y2I7 2098 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 MYLKQ15746 1914 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 TDRD6O60522 2096 aaKnown RBP4.57□□□□□ -1.68
DDB1-219ENST00000541513 ZFC3H1O60293 1989 aaKnown RBP4.57□□□□□ -1.68
DDB1-219ENST00000541513 A0A1B0GV90 55 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 FAM172BPA6NC97 362 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 CCRL2O00421 344 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 ARPC5O15511 151 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 TGOLN2O43493 480 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 UGT1A9O60656 530 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 AQP8O94778 261 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 IGLV3-19P01714 112 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 IGHV2-5P01817 119 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 CDK1P06493 297 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 CTSLP07711 333 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 CT45A6P0DMU7 189 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 CT45A5P0DMU8 189 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 CT45A7P0DMV0 189 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 SLC2A2P11168 524 aaPredicted RBP4.57□□□□□ -1.68
DDB1-219ENST00000541513 GABRG2P18507 467 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 CSNK2A2P19784 350 aaPredicted RBP4.57□□□□□ -1.68
DDB1-219ENST00000541513 ATP6V1B2P21281 511 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 GPR183P32249 361 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 MAGEA12P43365 314 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 FGF8P55075 233 aaPredicted RBP4.57□□□□□ -1.68
DDB1-219ENST00000541513 RHOAP61586 193 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 NAA20P61599 178 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 RPL31P62899 125 aaKnown RBP4.57□□□□□ -1.68
DDB1-219ENST00000541513 SLC10A7Q0GE19 358 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 TAF1AQ15573 450 aaPredicted RBP4.57□□□□□ -1.68
DDB1-219ENST00000541513 ZNF260Q3ZCT1 412 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 PDZD11Q5EBL8 140 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 VWA2Q5GFL6 755 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 CT45A1Q5HYN5 189 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 CPTPQ5TA50 214 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 MARC1Q5VT66 337 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 C8orf82Q6P1X6 216 aaPredicted RBP4.57□□□□□ -1.68
DDB1-219ENST00000541513 ZNF549Q6P9A3 640 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 Q6ZT83 130 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 FAM19A1Q7Z5A9 133 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 CALHM1Q8IU99 346 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 FBXL14Q8N1E6 418 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 STX19Q8N4C7 294 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 EID2Q8N6I1 236 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 CT45A3Q8NHU0 189 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 SPATA3Q8NHX4 192 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 VOPP1Q96AW1 172 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 EXOSC8Q96B26 276 aaKnown RBP4.57□□□□□ -1.68
DDB1-219ENST00000541513 PPWD1Q96BP3 646 aaKnown RBP4.57□□□□□ -1.68
DDB1-219ENST00000541513 SCMH1Q96GD3 660 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 TMEM80Q96HE8 168 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 OR8B4Q96RC9 309 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 STACQ99469 402 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 BARHL1Q9BZE3 327 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 ZNF430Q9H8G1 570 aaPredicted RBP4.57□□□□□ -1.68
DDB1-219ENST00000541513 RBM22Q9NW64 420 aaKnown RBP eCLIP4.57□□□□□ -1.684e-7■■■■■ 38
DDB1-219ENST00000541513 SLC25A37Q9NYZ2 338 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 NUDT4Q9NZJ9 180 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 MLXQ9UH92 298 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 SNX24Q9Y343 169 aa4.57□□□□□ -1.68
DDB1-219ENST00000541513 ZNF106Q9H2Y7 1883 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms