RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 FOSL2P15408 326 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 BLKP51451 505 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 MRPS21P82921 87 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 IL15RAQ13261 267 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 SMCO1Q147U7 214 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 TAF9Q16594 264 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 PNLIPRP3Q17RR3 467 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 EIF2S3LQ2VIR3 472 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 VAX1Q5SQQ9 334 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 GGNBP1Q5YKI7 109 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 IL34Q6ZMJ4 242 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 LHFPL1Q86WI0 220 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 OR11L1Q8NGX0 322 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 STT3BQ8TCJ2 826 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 CD300LFQ8TDQ1 290 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 MARS2Q96GW9 593 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 FAAP24Q9BTP7 215 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 PECRQ9BY49 303 aa9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 MRPL13Q9BYD1 178 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-207ENST00000540998 C7orf77A4D0Y5 90 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 VSTM2BA6NLU5 285 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 PATE4P0C8F1 98 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 PGA4P0DJD7 388 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 PGA3P0DJD8 388 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 TMEM225BP0DP42 221 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 CYCSP99999 105 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 NHLH2Q02577 135 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 TMEM268Q5VZI3 342 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 LYZL2Q7Z4W2 148 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 PEG10Q86TG7 708 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 UEVLDQ8IX04 471 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 ARRDC1Q8N5I2 433 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 TMEM156Q8N614 296 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 SUMF1Q8NBK3 374 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 DMBX1Q8NFW5 382 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 AKR7LQ8NHP1 331 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 MFSD8Q8NHS3 518 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 SGK3Q96BR1 496 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 GSN-AS1Q9NRJ2 163 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 FGF21Q9NSA1 209 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 BLACEA4D250 179 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 C3orf80F5H4A9 247 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 TRAF3IP2O43734 574 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 S100A6P06703 90 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 FABP1P07148 127 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 CELA2AP08217 269 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 GALNSP34059 522 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 PPP1CCP36873 323 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 RBMXP38159 391 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 HSD11B2P80365 405 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 TMEM176BQ3YBM2 270 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 COL13A1Q5TAT6 717 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 Q7L0L9 218 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 OR5L1Q8NGL2 311 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 TMEM234Q8WY98 164 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 PGAM5Q96HS1 289 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 SHDQ96IW2 340 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 RARRES2Q99969 163 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 CNTNAP3Q9BZ76 1288 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 GPR173Q9NS66 373 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 WBP1LQ9NX94 342 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 WIF1Q9Y5W5 379 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 LOC400499M0QZD8 3231 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 GPR37O15354 613 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 OR2J2O76002 312 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 GSTP1P09211 210 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 ZNF14P17017 642 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 PTAFRP25105 342 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 ACKR3P25106 362 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 CPEB2Q7Z5Q1 589 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 NOXO1Q8NFA2 376 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 OR52M1Q8NGK5 317 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 BCL2L14Q9BZR8 327 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 GPR27Q9NS67 375 aa9.08□□□□□ -0.96
CDC42SE1-207ENST00000540998 PQLC2LA1A4F0 135 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 ANKUB1A6NFN9 424 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 TSPAN15O95858 294 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 IFNA2P01563 188 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 MBPP02686 304 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 CHRM2P08172 466 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 FBP1P09467 338 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 NME1P15531 152 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 OMGP23515 440 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 PLA2G5P39877 138 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 SULT1A2P50226 295 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 CLDN17P56750 224 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 RAB5BP61020 215 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 SNAI3Q3KNW1 292 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 OGFOD3Q6PK18 319 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 DEGS2Q6QHC5 323 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 OR56B1Q8NGI3 324 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 FNDC9Q8TBE3 224 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 DDIT4LQ96D03 193 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 ZDHHC12Q96GR4 267 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 WDR77Q9BQA1 342 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 OCSTAMPQ9BR26 566 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 PPP4R1LQ9P1A2 415 aa9.07□□□□□ -0.96
CDC42SE1-207ENST00000540998 ZDHHC8Q9ULC8 765 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms