RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 PQLC2LA1A4F0 135 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 IRGMA1A4Y4 181 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 A8MXK9 166 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 E9PI62 339 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-215ENST00000540904 J3QLI3 93 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 TMPRSS2O15393 492 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 AVPP01185 164 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 ISG15P05161 165 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 LIMS3P0CW19 117 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 LIMS4P0CW20 117 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 MUC1P15941 1255 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-215ENST00000540904 ZNF12P17014 697 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 ADRA2CP18825 462 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 MYL12AP19105 171 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 DCKP27707 260 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 HAAOP46952 286 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 CCR9P51686 369 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 GBX2P52951 348 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-215ENST00000540904 AQP4P55087 323 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 ALKBH1Q13686 389 aaKnown RBP7.69□□□□□ -1.18
SNHG1-215ENST00000540904 WDR25Q64LD2 544 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-215ENST00000540904 C1orf229Q6ZS94 237 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-215ENST00000540904 ZNF573Q86YE8 665 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 CCDC54Q8NEL0 328 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 OR51A4Q8NGJ6 313 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 ZNF671Q8TAW3 534 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 TRMT10AQ8TBZ6 339 aaKnown RBP7.69□□□□□ -1.18
SNHG1-215ENST00000540904 TFAP2CQ92754 450 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 FGGYQ96C11 551 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 CCL13Q99616 98 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 JAM3Q9BX67 310 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 RASSF4Q9H2L5 321 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 SMURF1Q9HCE7 757 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 SNTG1Q9NSN8 517 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 SLC7A11Q9UPY5 501 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 POLR3KQ9Y2Y1 108 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-215ENST00000540904 NAV3Q8IVL0 2385 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 ABCA2Q9BZC7 2435 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 TRBV2A0A0J9YWF9 115 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 TMEM212A6NML5 194 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 OR4C45A6NMZ5 311 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 TNFRSF13BO14836 293 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-215ENST00000540904 SYNGR1O43759 233 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 XPNPEP2O43895 674 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 GATBO75879 557 aaKnown RBP7.68□□□□□ -1.18
SNHG1-215ENST00000540904 ZFPL1O95159 310 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 SERPINA3P01011 423 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 ZNF20P17024 532 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 GLRA1P23415 457 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 GTF2A1P52655 376 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-215ENST00000540904 ST3GAL4Q11206 333 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 MRPL28Q13084 256 aaKnown RBP7.68□□□□□ -1.18
SNHG1-215ENST00000540904 UBE2V2Q15819 145 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 KRTAP21-3Q3LHN1 58 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 OR2G6Q5TZ20 316 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 LAIR2Q6ISS4 152 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 BTNL3Q6UXE8 466 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 TMPRSS11AQ6ZMR5 421 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 ZNF841Q6ZN19 808 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 ANGPTL5Q86XS5 388 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 EGFL6Q8IUX8 553 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 BPIFB6Q8NFQ5 453 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 OR13C3Q8NGS6 347 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 OR10Z1Q8NGY1 313 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 OR10AC1Q8NH08 325 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 PP6455Q8WZ26 134 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 AQP3Q92482 292 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 GGHQ92820 318 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 C12orf43Q96C57 262 aaKnown RBP7.68□□□□□ -1.18
SNHG1-215ENST00000540904 C10orf35Q96D05 121 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 ADAT3Q96EY9 351 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-215ENST00000540904 TMEM80Q96HE8 168 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 ZNF488Q96MN9 340 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 PDCD1LG2Q9BQ51 273 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 MRI1Q9BV20 369 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 CHST5Q9GZS9 411 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 VCX3BQ9H321 246 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 CHCHD3Q9NX63 227 aaKnown RBP7.68□□□□□ -1.18
SNHG1-215ENST00000540904 OPN4Q9UHM6 478 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 CLEC2DQ9UHP7 191 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 HHLA2Q9UM44 414 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 DIMT1Q9UNQ2 313 aaKnown RBP7.68□□□□□ -1.18
SNHG1-215ENST00000540904 CAB39Q9Y376 341 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-215ENST00000540904 EXOSC1Q9Y3B2 195 aaKnown RBP7.68□□□□□ -1.18
SNHG1-215ENST00000540904 INSIG2Q9Y5U4 225 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 AUP1Q9Y679 476 aa7.68□□□□□ -1.18
SNHG1-215ENST00000540904 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.68□□□□□ -1.183e-20■■■■■ 62.8
SNHG1-215ENST00000540904 IGHV2-70DA0A0C4DH43 119 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 A0A1B0GW55 424 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 EFCAB10A6NFE3 127 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 C22orf46C9J442 243 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 H0YJX3 145 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 J3QT63 122 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 DVL1O14640 695 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 PLATP00750 562 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 TFF1P04155 84 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 CCDC159P0C7I6 412 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 OCM2P0CE71 109 aa7.67□□□□□ -1.18
SNHG1-215ENST00000540904 OCMP0CE72 109 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms