RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 SLC17A2O00624 439 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 LDLRAD4O15165 306 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 NOS1APO75052 506 aaPredicted RBP8.92□□□□□ -0.98
VPS33A-204ENST00000540669 RP2O75695 350 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 FSTL3O95633 263 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 ERCC1P07992 297 aaPredicted RBP8.92□□□□□ -0.98
VPS33A-204ENST00000540669 SDC2P34741 201 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 GNALP38405 381 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 OR10A3P58181 314 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 SELENOVP59797 346 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 KRTAP10-9P60411 292 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 ERVK11-1P61568 191 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 SNRPD2P62316 118 aaKnown RBP8.92□□□□□ -0.98
VPS33A-204ENST00000540669 PPP3R1P63098 170 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 MRPS11P82912 194 aaKnown RBP8.92□□□□□ -0.98
VPS33A-204ENST00000540669 QRFPP83859 136 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 RIN1Q13671 783 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 KISS1Q15726 138 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 NKPD1Q17RQ9 610 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 ZNF181Q2M3W8 571 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 LHFPL2Q6ZUX7 228 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 USP43Q70EL4 1123 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 CALHM1Q8IU99 346 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 SAXO1Q8IYX7 474 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 PIGCQ92535 297 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 ELMOD3Q96FG2 381 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 SORCS2Q96PQ0 1159 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 RTL8AQ9BWD3 113 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 CXXC4Q9H2H0 198 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 MS4A5Q9H3V2 200 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 UBTD1Q9HAC8 227 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 EXOSC4Q9NPD3 245 aaKnown RBP8.92□□□□□ -0.98
VPS33A-204ENST00000540669 IL36GQ9NZH8 169 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 CKLFQ9UBR5 152 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 FBLN5Q9UBX5 448 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 RSL24D1Q9UHA3 163 aaKnown RBP8.92□□□□□ -0.98
VPS33A-204ENST00000540669 ITGB1BP2Q9UKP3 347 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 OTOGQ6ZRI0 2925 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 CREBBPQ92793 2442 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 DYSFO75923 2080 aa8.92□□□□□ -0.98
VPS33A-204ENST00000540669 IGKV1-12A0A0C4DH73 117 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 PLSCR5A0PG75 271 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 ANXA2P2A6NMY6 339 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 IFITM5A6NNB3 132 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 NOTOA8MTQ0 251 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 J3QT63 122 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 AIPO00170 330 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 IGKV1D-12P01611 117 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 CLEC2LP0C7M8 214 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 RAB3BP20337 219 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 MYL9P24844 172 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 RPS19P39019 145 aaKnown RBP8.91□□□□□ -0.98
VPS33A-204ENST00000540669 PMELP40967 661 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 RBP2P50120 134 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 SCAND1P57086 179 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 IL24Q13007 206 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 DYNC1I2Q13409 638 aaKnown RBP8.91□□□□□ -0.98
VPS33A-204ENST00000540669 OR8G1Q15617 311 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 DDI2Q5TDH0 399 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 SFXN4Q6P4A7 337 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 WDR82Q6UXN9 313 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 DNM1P46Q6ZS02 220 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 ZSCAN4Q8NAM6 433 aaPredicted RBP8.91□□□□□ -0.98
VPS33A-204ENST00000540669 PXT1Q8NFP0 134 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 OR4D6Q8NGJ1 314 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 OR6M1Q8NGM8 313 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 AQP3Q92482 292 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 ERGIC1Q969X5 290 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 DGCR14Q96DF8 476 aaKnown RBP8.91□□□□□ -0.98
VPS33A-204ENST00000540669 OR2V2Q96R30 315 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 CCL19Q99731 98 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 MICU1Q9BPX6 476 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 SLIRPQ9GZT3 109 aaKnown RBP8.91□□□□□ -0.98
VPS33A-204ENST00000540669 NXF2Q9GZY0 626 aaKnown RBP8.91□□□□□ -0.98
VPS33A-204ENST00000540669 DCSTAMPQ9H295 470 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 HES4Q9HCC6 221 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 TCF7L1Q9HCS4 588 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 CCDC59Q9P031 241 aaKnown RBP8.91□□□□□ -0.98
VPS33A-204ENST00000540669 PMF1-BGLAPU3KQ54 211 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 ITPR3Q14573 2671 aa8.91□□□□□ -0.98
VPS33A-204ENST00000540669 PRRC2AP48634 2157 aaKnown RBP8.9□□□□□ -0.98
VPS33A-204ENST00000540669 CCDC168Q8NDH2 2452 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 ABCA2Q9BZC7 2435 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.9□□□□□ -0.98
VPS33A-204ENST00000540669 SRRM5B3KS81 715 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 CDRT1O95170 752 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 LHBP01229 141 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 PGA5P0DJD9 388 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 BMP4P12644 408 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 GPM6AP51674 278 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 LSM3P62310 102 aaKnown RBP8.9□□□□□ -0.98
VPS33A-204ENST00000540669 MPPED2Q15777 294 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 DMRTC1Q5HYR2 192 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 NHLRC3Q5JS37 347 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 MOB3CQ70IA8 216 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 ZNF573Q86YE8 665 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 ZCCHC24Q8N2G6 241 aaKnown RBP8.9□□□□□ -0.98
VPS33A-204ENST00000540669 OR2Z1Q8NG97 314 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 OR10Z1Q8NGY1 313 aa8.9□□□□□ -0.98
VPS33A-204ENST00000540669 TBC1D15Q8TC07 691 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms