RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PTGER4P35408 488 aa11.95□□□□□ -0.5
BNIP3-202ENST00000540159 AKR1D1P51857 326 aa11.95□□□□□ -0.5
BNIP3-202ENST00000540159 SLC35A1P78382 337 aa11.95□□□□□ -0.5
BNIP3-202ENST00000540159 IAH1Q2TAA2 248 aaPredicted RBP11.95□□□□□ -0.5
BNIP3-202ENST00000540159 SLC23A3Q6PIS1 610 aa11.95□□□□□ -0.5
BNIP3-202ENST00000540159 TLNRD1Q9H1K6 362 aa11.95□□□□□ -0.5
BNIP3-202ENST00000540159 NELFAQ9H3P2 528 aa11.95□□□□□ -0.5
BNIP3-202ENST00000540159 CACNA1GO43497 2377 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 KIAA2026Q5HYC2 2103 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 CSTBP04080 98 aaKnown RBP11.94□□□□□ -0.5
BNIP3-202ENST00000540159 KLK3P07288 261 aaPredicted RBP11.94□□□□□ -0.5
BNIP3-202ENST00000540159 NFYBP25208 207 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 ZNF345Q14585 488 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 GJC3Q8NFK1 279 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 OR9K2Q8NGE7 335 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 OR14L1PQ8NHC6 308 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 LIME1Q9H400 295 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 HS3ST3B1Q9Y662 390 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 CNOT1A5YKK6 2376 aaKnown RBP11.94□□□□□ -0.5
BNIP3-202ENST00000540159 CEP250Q9BV73 2442 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 ZIC3O60481 467 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 NXPH3O95157 252 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 GSTP1P09211 210 aaKnown RBP11.94□□□□□ -0.5
BNIP3-202ENST00000540159 TPT1P13693 172 aaKnown RBP11.94□□□□□ -0.5
BNIP3-202ENST00000540159 ETV3LQ6ZN32 361 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 ZFP82Q8N141 532 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 FGFBP3Q8TAT2 258 aa11.94□□□□□ -0.5
BNIP3-202ENST00000540159 NECAB3Q96P71 396 aaPredicted RBP11.94□□□□□ -0.5
BNIP3-202ENST00000540159 CACNA1DQ01668 2161 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 GVINP1Q7Z2Y8 2422 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 CCDC187A0A096LP49 1063 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 DHRS3O75911 302 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 CD63P08962 238 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 MED9Q9NWA0 146 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 DOCK10Q96BY6 2186 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 MED13Q9UHV7 2174 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 DBX1A6NMT0 343 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 MSTNO14793 375 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 CXCL13O43927 109 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 RSU1Q15404 277 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 WIPI1Q5MNZ9 446 aaPredicted RBP11.93□□□□□ -0.5
BNIP3-202ENST00000540159 RPS19BP1Q86WX3 136 aaKnown RBP11.93□□□□□ -0.5
BNIP3-202ENST00000540159 CARFQ8N187 725 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 OR5L1Q8NGL2 311 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 C2CD4CQ8TF44 421 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 MRPL24Q96A35 216 aaKnown RBP11.93□□□□□ -0.5
BNIP3-202ENST00000540159 SGK3Q96BR1 496 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 ZNF845Q96IR2 970 aaPredicted RBP11.93□□□□□ -0.5
BNIP3-202ENST00000540159 OR51B6Q9H340 312 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 PROK2Q9HC23 129 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 MYOZ1Q9NP98 299 aaPredicted RBP11.93□□□□□ -0.5
BNIP3-202ENST00000540159 CYTL1Q9NRR1 136 aa11.93□□□□□ -0.5
BNIP3-202ENST00000540159 IGKV1-27A0A075B6S5 117 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 A0A1B0GW55 424 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 GEMIN2O14893 280 aaKnown RBP11.92□□□□□ -0.5
BNIP3-202ENST00000540159 MTRF1O75570 445 aaKnown RBP11.92□□□□□ -0.5
BNIP3-202ENST00000540159 DUX4L2P0CJ85 424 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 DUX4L3P0CJ86 424 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 DUX4L4P0CJ87 422 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 DUX4L5P0CJ88 424 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 DUX4L6P0CJ89 424 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 DUX4L7P0CJ90 424 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 GRB2P62993 217 aaKnown RBP11.92□□□□□ -0.5
BNIP3-202ENST00000540159 ECH1Q13011 328 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 RBM39Q14498 530 aaKnown RBP11.92□□□□□ -0.5
BNIP3-202ENST00000540159 H3F3CQ6NXT2 135 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 MRPL14Q6P1L8 145 aaKnown RBP11.92□□□□□ -0.5
BNIP3-202ENST00000540159 OR4A4PQ8NGN8 299 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 OR6S1Q8NH40 331 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 NABP1Q96AH0 204 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 BSCL2Q96G97 398 aaPredicted RBP11.92□□□□□ -0.5
BNIP3-202ENST00000540159 MOB1AQ9H8S9 216 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 DUX4Q9UBX2 424 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 HDGFL3Q9Y3E1 203 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 BDP1A6H8Y1 2624 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 NSG1A0A0A6YYJ2 146 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 NPIPB13A6NJU9 1138 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 NPIPB4C9JG80 1138 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 MED6O75586 246 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 RBMXP38159 391 aaKnown RBP11.92□□□□□ -0.5
BNIP3-202ENST00000540159 RGS19P49795 217 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 STARD6P59095 220 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 RIPPLY1Q0D2K3 151 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 COL19A1Q14993 1142 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 OR11L1Q8NGX0 322 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 ABHD3Q8WU67 409 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 HLA-CQ95604 372 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 MARS2Q96GW9 593 aaKnown RBP11.92□□□□□ -0.5
BNIP3-202ENST00000540159 SHDQ96IW2 340 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 C14orf166Q9Y224 244 aaKnown RBP11.92□□□□□ -0.5
BNIP3-202ENST00000540159 NCKAP5O14513 1909 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 A0A096LPE4 126 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 IGHV1-45A0A0A0MS14 117 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 A0A1W2PPZ6 126 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 TMEM218A2RU14 115 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 SGCEO43556 437 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 KLF7O75840 302 aaPredicted RBP11.92□□□□□ -0.5
BNIP3-202ENST00000540159 ATG12O94817 140 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 COX6A1P12074 109 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 ZNF32P17041 273 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms