RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ADH4P08319 380 aa16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 RBP2P50120 134 aa16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 MTCP1P56278 107 aa16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 GNG3P63215 75 aa16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 GLT8D1Q68CQ7 371 aa16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 LHFPL2Q6ZUX7 228 aa16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 JAGN1Q8N5M9 183 aa16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 MS4A5Q9H3V2 200 aa16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 METTL17Q9H7H0 456 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 NEK6Q9HC98 313 aa16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 LAMP3Q9UQV4 416 aa16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 NOTOA8MTQ0 251 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ZNF182P17025 639 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ZNF93P35789 620 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 CD200P41217 278 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ATP1B3P54709 279 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 HNRNPA0Q13151 305 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 FAM76BQ5HYJ3 339 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ANGPTL5Q86XS5 388 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 DYNC2LI1Q8TCX1 351 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 SLC25A46Q96AG3 418 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 BARHL1Q9BZE3 327 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 NKIRAS2Q9NYR9 191 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 F8P00451 2351 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 TEP1Q99973 2627 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 PSMD7P51665 324 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 TNFAIP6P98066 277 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ZNF154Q13106 437 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 PRAMEF6Q5VXH4 476 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 SFXN4Q6P4A7 337 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 CALHM1Q8IU99 346 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 CDH26Q8IXH8 852 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 OR5D18Q8NGL1 313 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 MEGF10Q96KG7 1140 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 OR2V2Q96R30 315 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 DIRC2Q96SL1 478 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 GPER1Q99527 375 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 DCUN1D5Q9BTE7 237 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 CNTD2Q9H8S5 307 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 C14orf119Q9NWQ9 140 aa16.04■□□□□ 0.16
TNFRSF1A-213ENST00000540022 IFITM5A6NNB3 132 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 GRPP07492 148 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 CD55P08174 381 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 SLC2A2P11168 524 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 HAAOP46952 286 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 OR3A4PP47883 348 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 PPOXP50336 477 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 CCL8P80075 99 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 C1orf100Q5SVJ3 147 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 HES5Q5TA89 166 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 OR4D6Q8NGJ1 314 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ITLN1Q8WWA0 313 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 FOXRED1Q96CU9 486 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 OR51I2Q9H344 312 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 PLGRKTQ9HBL7 147 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 IL19Q9UHD0 177 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 MED13LQ71F56 2210 aa16.03■□□□□ 0.16
TNFRSF1A-213ENST00000540022 TMEM210A6NLX4 147 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 AIPO00170 330 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SLC17A2O00624 439 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 PTBP3O95758 552 aaKnown RBP16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 PLATP00750 562 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 POU3F4P49335 361 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 ZP1P60852 638 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 MPPED2Q15777 294 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 FAM209AQ5JX71 171 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 FAM166AQ6J272 317 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 C20orf204Q6ZNR8 217 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CDH24Q86UP0 819 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SORCS2Q96PQ0 1159 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 VRK1Q99986 396 aaPredicted RBP16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 UQCC2Q9BRT2 126 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CACNG6Q9BXT2 260 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 DAPK2Q9UIK4 370 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 PMF1-BGLAPU3KQ54 211 aa16.02■□□□□ 0.15
TNFRSF1A-213ENST00000540022 LRP5LA4QPB2 252 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SPRY1O43609 319 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 TNFSF4P23510 183 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SRP9P49458 86 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 RORCP51449 518 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CLDN12P56749 244 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 MZT1Q08AG7 82 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CNPY1Q3B7I2 92 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 HAGHLQ6PII5 290 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 C1QL2Q7Z5L3 287 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 ZNF573Q86YE8 665 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 C11orf53Q8IXP5 236 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CELF2-AS1Q8N7Q2 184 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SCCPDHQ8NBX0 429 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 IGFBPL1Q8WX77 278 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 SLC25A28Q96A46 364 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CPNE2Q96FN4 548 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 UFSP2Q9NUQ7 469 aa16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 FBXO9Q9UK97 447 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-213ENST00000540022 A0A0B4J203 849 aa16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CDIPTO14735 213 aa16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 BMP4P12644 408 aa16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 CFPP27918 469 aa16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 HTR2CP28335 458 aa16■□□□□ 0.15
TNFRSF1A-213ENST00000540022 PTGFRP43088 359 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms