RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 SCN3BQ9NY72 215 aa11.23□□□□□ -0.61
PRPF19-204ENST00000539960 ERVK-18Q9QC07 812 aa11.23□□□□□ -0.61
PRPF19-204ENST00000539960 SLC7A11Q9UPY5 501 aa11.23□□□□□ -0.61
PRPF19-204ENST00000539960 SRRM5B3KS81 715 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.22□□□□□ -0.61
PRPF19-204ENST00000539960 FOXH1O75593 365 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 RHBDL1O75783 438 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 GATBO75879 557 aaKnown RBP11.22□□□□□ -0.61
PRPF19-204ENST00000539960 MUC1P15941 1255 aaPredicted RBP11.22□□□□□ -0.61
PRPF19-204ENST00000539960 CD80P33681 288 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 RIPPLY3P57055 190 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 LCN2P80188 198 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 MICBQ29980 383 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 ESCO2Q56NI9 601 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 XAF1Q6GPH4 301 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 HAGHLQ6PII5 290 aaPredicted RBP11.22□□□□□ -0.61
PRPF19-204ENST00000539960 FAM90A1Q86YD7 464 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 ZNF573Q86YE8 665 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 OR51A4Q8NGJ6 313 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 OR13C3Q8NGS6 347 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 MYDGFQ969H8 173 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 NEIL1Q96FI4 390 aaPredicted RBP11.22□□□□□ -0.61
PRPF19-204ENST00000539960 TECTBQ96PL2 329 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 CHST5Q9GZS9 411 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 COMMD4Q9H0A8 199 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 RAB26Q9ULW5 256 aa11.22□□□□□ -0.61
PRPF19-204ENST00000539960 POLR3KQ9Y2Y1 108 aaPredicted RBP11.22□□□□□ -0.61
PRPF19-204ENST00000539960 SIRT4Q9Y6E7 314 aaPredicted RBP11.22□□□□□ -0.61
PRPF19-204ENST00000539960 MALRD1Q5VYJ5 2156 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 IGHV3OR15-7A0A075B7D8 119 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 FAM230AA0A1W2PPH8 454 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 SLC1A7O00341 560 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 AKR7A2O43488 359 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 GYPAP02724 150 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 CDK1P06493 297 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 RPS2P15880 293 aaKnown RBP11.21□□□□□ -0.61
PRPF19-204ENST00000539960 ZNF20P17024 532 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 HOXB4P17483 251 aaPredicted RBP11.21□□□□□ -0.61
PRPF19-204ENST00000539960 PCMT1P22061 227 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 HAAOP46952 286 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 FUT6P51993 359 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 SEC61A1P61619 476 aaKnown RBP11.21□□□□□ -0.61
PRPF19-204ENST00000539960 CR1LQ2VPA4 569 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 FAM120AOSQ5T036 256 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 RNLSQ5VYX0 342 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 ZNF841Q6ZN19 808 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 UTS2BQ765I0 119 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 NLRC3Q7RTR2 1065 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 NANOGP1Q8N7R0 232 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 OR8B3Q8NGG8 313 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 RPS4Y2Q8TD47 263 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 SEH1LQ96EE3 360 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 OR8B2Q96RD0 313 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 BEX2Q9BXY8 128 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 WDR13Q9H1Z4 485 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 CDC42EP3Q9UKI2 254 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 LRCH1Q9Y2L9 728 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 TPRKBQ9Y3C4 175 aa11.21□□□□□ -0.61
PRPF19-204ENST00000539960 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.21□□□□□ -0.621e-14■■■■■ 31.4
PRPF19-204ENST00000539960 PPIAL4CA0A0B4J2A2 164 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 IGKV1-9A0A0C4DH69 117 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 KIAA1324LA8MWY0 1029 aaPredicted RBP11.2□□□□□ -0.62
PRPF19-204ENST00000539960 A8MXK9 166 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 TRAPPC2LH3BP13 241 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 J3QT63 122 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 PHF1O43189 567 aaPredicted RBP11.2□□□□□ -0.62
PRPF19-204ENST00000539960 ADAM20O43506 726 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 NOS1APO75052 506 aaPredicted RBP11.2□□□□□ -0.62
PRPF19-204ENST00000539960 LALBAP00709 142 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 ACAA1P09110 424 aaPredicted RBP11.2□□□□□ -0.62
PRPF19-204ENST00000539960 ATF1P18846 271 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 PRKACBP22694 351 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 PITPNBP48739 271 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 CDK5R1Q15078 307 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 CHRFAM7AQ494W8 412 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 FAHD2BQ6P2I3 314 aaPredicted RBP11.2□□□□□ -0.62
PRPF19-204ENST00000539960 ANGPTL5Q86XS5 388 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 DNAAF1Q8NEP3 725 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 OR5T2Q8NGG2 359 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 TRMT10AQ8TBZ6 339 aaKnown RBP11.2□□□□□ -0.62
PRPF19-204ENST00000539960 NPRL2Q8WTW4 380 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 C12orf43Q96C57 262 aaKnown RBP11.2□□□□□ -0.62
PRPF19-204ENST00000539960 FAHD2AQ96GK7 314 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 CNBD2Q96M20 576 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 SSBP3Q9BWW4 388 aaPredicted RBP11.2□□□□□ -0.62
PRPF19-204ENST00000539960 CDCA4Q9BXL8 241 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 SHARPINQ9H0F6 387 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 DUSP21Q9H596 190 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 RASL12Q9NYN1 266 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 KAAG1Q9UBP8 84 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 LPAR3Q9UBY5 353 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 ERGIC3Q9Y282 383 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 PCDHGB5Q9Y5G0 923 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 ABCA2Q9BZC7 2435 aa11.2□□□□□ -0.62
PRPF19-204ENST00000539960 MYL12BO14950 172 aa11.19□□□□□ -0.62
PRPF19-204ENST00000539960 SYNGR1O43759 233 aa11.19□□□□□ -0.62
PRPF19-204ENST00000539960 MT-ND2P03891 347 aa11.19□□□□□ -0.62
PRPF19-204ENST00000539960 GLRA1P23415 457 aa11.19□□□□□ -0.62
PRPF19-204ENST00000539960 GATA3P23771 443 aa11.19□□□□□ -0.62
PRPF19-204ENST00000539960 MPZP25189 248 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms