RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 LDLRAD4O15165 306 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 B3GALNT1O75752 331 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 RAD51DO75771 328 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 LYZL6O75951 148 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 BPNT1O95861 308 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 FAHP16930 419 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 MADCAM1Q13477 382 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 SSC4DQ8WTU2 575 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 ABHD1Q96SE0 405 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 PIEZO2Q9H5I5 2752 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 CNTD2Q9H8S5 307 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 OBP2BQ9NPH6 170 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 PFDN2Q9UHV9 154 aa14.62□□□□□ -0.07
COPS3-212ENST00000539941 TMEM272A0A1B0GTI8 110 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 A0A1B0GW55 424 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 SMLR1H3BR10 107 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 GSTZ1O43708 216 aaPredicted RBP14.61□□□□□ -0.07
COPS3-212ENST00000539941 S100A6P06703 90 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 HCKP08631 526 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 DUX4L2P0CJ85 424 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 DUX4L3P0CJ86 424 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 DUX4L4P0CJ87 422 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 DUX4L5P0CJ88 424 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 DUX4L6P0CJ89 424 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 DUX4L7P0CJ90 424 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 RAB6AP20340 208 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 SLC6A1P30531 599 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 HOXC12P31275 282 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 GSK3AP49840 483 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 MRPS10P82664 201 aaKnown RBP14.61□□□□□ -0.07
COPS3-212ENST00000539941 FAM3AP98173 230 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 ZNF92Q03936 586 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 MALLQ13021 153 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 FCN2Q15485 313 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 GFRALQ6UXV0 394 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 KRT74Q7RTS7 529 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 CLRN3Q8NCR9 226 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 OR4D6Q8NGJ1 314 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 SPSB1Q96BD6 273 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 SNRNP40Q96DI7 357 aaKnown RBP14.61□□□□□ -0.07
COPS3-212ENST00000539941 DPCDQ9BVM2 203 aaPredicted RBP14.61□□□□□ -0.07
COPS3-212ENST00000539941 SDHAF2Q9NX18 166 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 DUX4Q9UBX2 424 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 FBLN5Q9UBX5 448 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 ZNF835Q9Y2P0 537 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 NUBP2Q9Y5Y2 271 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 BAHCC1Q9P281 2608 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 IGKV1-9A0A0C4DH69 117 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 CCNOP22674 350 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 ACKR3P25106 362 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 TBC1D28Q2M2D7 210 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 TMEM69Q5SWH9 247 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 TMEM42Q69YG0 159 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 ZNF610Q8N9Z0 462 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 UXS1Q8NBZ7 420 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 SLC30A7Q8NEW0 376 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 RFT1Q96AA3 541 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 CPNE2Q96FN4 548 aaPredicted RBP14.61□□□□□ -0.07
COPS3-212ENST00000539941 TECTBQ96PL2 329 aa14.61□□□□□ -0.07
COPS3-212ENST00000539941 INTS1Q8N201 2190 aaKnown RBP14.6□□□□□ -0.07
COPS3-212ENST00000539941 A0A0A6YYH2 397 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 A6NJ64 397 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 M0R233 179 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 XRCC3O43542 346 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 CTAG2O75638 210 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 CBR1P16152 277 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 ZNF14P17017 642 aaPredicted RBP14.6□□□□□ -0.07
COPS3-212ENST00000539941 CDK2P24941 298 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 ZNF81P51508 661 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 RBPJQ06330 500 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 MRPL49Q13405 166 aaKnown RBP14.6□□□□□ -0.07
COPS3-212ENST00000539941 LY6DQ14210 128 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 CNN3Q15417 329 aaKnown RBP14.6□□□□□ -0.07
COPS3-212ENST00000539941 ZNF843Q8N446 348 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 EIF4E3Q8N5X7 224 aaKnown RBP14.6□□□□□ -0.07
COPS3-212ENST00000539941 PNLDC1Q8NA58 520 aaKnown RBP14.6□□□□□ -0.07
COPS3-212ENST00000539941 OR5L1Q8NGL2 311 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 THAP7Q9BT49 309 aaPredicted RBP14.6□□□□□ -0.07
COPS3-212ENST00000539941 REPIN1Q9BWE0 567 aaKnown RBP14.6□□□□□ -0.07
COPS3-212ENST00000539941 OPN3Q9H1Y3 402 aaPredicted RBP14.6□□□□□ -0.07
COPS3-212ENST00000539941 GHITMQ9H3K2 345 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 ZNF222Q9UK12 451 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 RAB22AQ9UL26 194 aa14.6□□□□□ -0.07
COPS3-212ENST00000539941 MRPS7Q9Y2R9 242 aaKnown RBP14.6□□□□□ -0.07
COPS3-212ENST00000539941 MEIKINA0A087WXM9 373 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 A0A0A6YYJ9 748 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 A8MXK9 166 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 UBBP0CG47 229 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 GLI4P10075 376 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 PTH2RP49190 550 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 KLRB1Q12918 225 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 UBE2V2Q15819 145 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 PLA1AQ53H76 456 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 OR2W3Q7Z3T1 314 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 DOLPP1Q86YN1 238 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 NAXEQ8NCW5 288 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 SMIM4Q8WVI0 70 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 ACTR6Q9GZN1 396 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 GHRLQ9UBU3 117 aa14.59□□□□□ -0.07
COPS3-212ENST00000539941 KCNK7Q9Y2U2 307 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms