RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 TMEM212A6NML5 194 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF727A8MUV8 499 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 ZBTB42B2RXF5 422 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 J3QL48 77 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 PIRO00625 290 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 ALOX12BO75342 701 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 VENTXO95231 258 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 TSPAN13O95857 204 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 CD160O95971 181 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF708P17019 499 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF43P17038 809 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 EN2P19622 333 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-211ENST00000539921 GZMHP20718 246 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 GDF1P27539 372 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 GRK4P32298 578 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 GJA4P35212 333 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 APOBEC1P41238 236 aaKnown RBP5.43□□□□□ -1.54
SNHG1-211ENST00000539921 NPBWR2P48146 333 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 TAS2R41P59536 307 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 TAS2R50P59544 299 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 LCN6P62502 163 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 RPL23AP62750 156 aaKnown RBP5.43□□□□□ -1.54
SNHG1-211ENST00000539921 ZXDBP98169 803 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF117Q03924 483 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 BAXQ07812 192 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 PIN1Q13526 163 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-211ENST00000539921 PMCHL1Q16048 86 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 C18orf21Q32NC0 220 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF385BQ569K4 471 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF684Q5T5D7 378 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 FAM90A2PQ658T7 463 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 KCNIP4Q6PIL6 250 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 SPSB3Q6PJ21 355 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 IGF2-ASQ6U949 168 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 TMPRSS12Q86WS5 348 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 SGPP2Q8IWX5 399 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 PIANPQ8IYJ0 282 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF683Q8IZ20 524 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 CMTM1Q8IZ96 169 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 TMEM86AQ8N2M4 240 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 SLC16A11Q8NCK7 471 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 OR4D11Q8NGI4 311 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 SKA2Q8WVK7 121 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-211ENST00000539921 VWCEQ96DN2 955 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 SFRP2Q96HF1 295 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 FER1L6-AS2Q96M78 137 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 SIGLEC12Q96PQ1 595 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 TSPAN32Q96QS1 320 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 KLHDC3Q9BQ90 382 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 EFCAB11Q9BUY7 163 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 EBPLQ9BY08 206 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 MEGF9Q9H1U4 602 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 ZFAND3Q9H8U3 227 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 GPR84Q9NQS5 396 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 MBNL1Q9NR56 388 aaKnown RBP5.43□□□□□ -1.54
SNHG1-211ENST00000539921 MRPL22Q9NWU5 206 aaKnown RBP5.43□□□□□ -1.54
SNHG1-211ENST00000539921 ARL15Q9NXU5 204 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 SERTAD3Q9UJW9 196 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 PPP1R3CQ9UQK1 317 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 MRPS28Q9Y2Q9 187 aaKnown RBP5.43□□□□□ -1.54
SNHG1-211ENST00000539921 MGAMO43451 1857 aa5.43□□□□□ -1.54
SNHG1-211ENST00000539921 SMIM35A0A1B0GVV1 85 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 A0A1W2PNV4 684 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 C1QTNF9BB2RNN3 333 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF732B4DXR9 585 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 HHLA1C9JL84 531 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 C1QTNF3-AMACRE9PGA6 284 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 TMEM250H0YL14 139 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 M0QZ24 198 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 HMGN4O00479 90 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 CCL22O00626 93 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 HCRTR1O43613 425 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 HYPMO75409 117 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 MTX2O75431 263 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 ZIC2O95409 532 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 EFEMP2O95967 443 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 SCGB1D2O95969 90 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 IGSF6O95976 241 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 MT-CO2P00403 227 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 CGAP01215 116 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 IFNA1P01562 189 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 HLA-DRB1P01911 266 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 PRH1P02810 166 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 IRF1P10914 325 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 ST6GAL1P15907 406 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 ADRA2CP18825 462 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 CORO1AP31146 461 aaKnown RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 GDF5P43026 501 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 TFPI2P48307 235 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 RPS15P62841 145 aaKnown RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 SUMO1P63165 101 aaKnown RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 BTN3A2P78410 334 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 RAB32Q13637 225 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 COX19Q49B96 90 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 ATXN7L2Q5T6C5 722 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 RAET1LQ5VY80 246 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 C9orf57Q5W0N0 161 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 LCNL1Q6ZST4 164 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 HFE2Q6ZVN8 426 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 COX15Q7KZN9 410 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms