RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ANXA2P2A6NMY6 339 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 C17orf100A8MU93 164 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 SPRY3O43610 288 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 GATBO75879 557 aaKnown RBP13.14□□□□□ -0.31
DDB1-216ENST00000539739 SNAPINO95295 136 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 NRASP01111 189 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 HLA-DPB1P04440 258 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 ERP29P30040 261 aaKnown RBP13.14□□□□□ -0.31
DDB1-216ENST00000539739 GP2P55259 537 aaKnown RBP13.14□□□□□ -0.31
DDB1-216ENST00000539739 KRTAP10-9P60411 292 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 RPS11P62280 158 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDB1-216ENST00000539739 IFITM3Q01628 133 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 MZT1Q08AG7 82 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 SSX1Q16384 188 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 PAMR1Q6UXH9 720 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 Q6ZR03 302 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 KRT74Q7RTS7 529 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 SERPINA12Q8IW75 414 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 OR2Z1Q8NG97 314 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 OR13C5Q8NGS8 318 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 TMEM106AQ96A25 262 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 RAB1BQ9H0U4 201 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 PPA2Q9H2U2 334 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 SPG11Q96JI7 2443 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 ZNF850A8MQ14 1090 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 ZNF879B4DU55 563 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 LMX1BO60663 402 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 RAF1P04049 648 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 HTR2BP41595 481 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 MAGEB1P43366 347 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 NKX2-5P52952 324 aaPredicted RBP13.13□□□□□ -0.31
DDB1-216ENST00000539739 RPS25P62851 125 aaKnown RBP13.13□□□□□ -0.31
DDB1-216ENST00000539739 PRDX4Q13162 271 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 PCGF3Q3KNV8 242 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 ACSM3Q53FZ2 586 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 ZDHHC23Q8IYP9 409 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 OR5D14Q8NGL3 314 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 OR8S1Q8NH09 359 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 GTF3AQ92664 365 aaKnown RBP13.13□□□□□ -0.31
DDB1-216ENST00000539739 DACT3Q96B18 629 aaPredicted RBP13.13□□□□□ -0.31
DDB1-216ENST00000539739 ADAT3Q96EY9 351 aaPredicted RBP13.13□□□□□ -0.31
DDB1-216ENST00000539739 ELMOD3Q96FG2 381 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 TECTBQ96PL2 329 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 OR14A2Q96R54 314 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 ADAT1Q9BUB4 502 aaKnown RBP13.13□□□□□ -0.31
DDB1-216ENST00000539739 C6orf62Q9GZU0 229 aaPredicted RBP13.13□□□□□ -0.31
DDB1-216ENST00000539739 LIME1Q9H400 295 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 NKIRAS2Q9NYR9 191 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 GLS2Q9UI32 602 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 SF3B6Q9Y3B4 125 aaKnown RBP13.13□□□□□ -0.31
DDB1-216ENST00000539739 CELSR2Q9HCU4 2923 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 ANKRD61A6NGH8 418 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 H7C417 338 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 RGS9O75916 674 aaPredicted RBP13.13□□□□□ -0.31
DDB1-216ENST00000539739 IGHV1-46P01743 117 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 TMEM42Q69YG0 159 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 MOB3CQ70IA8 216 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 LYSMD2Q8IV50 215 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 PARP16Q8N5Y8 322 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 OR10AD1Q8NGE0 317 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 NRGNQ92686 78 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 RBM14Q96PK6 669 aaKnown RBP13.13□□□□□ -0.31
DDB1-216ENST00000539739 MICU1Q9BPX6 476 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 CHST5Q9GZS9 411 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 DECR2Q9NUI1 292 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 BAHCC1Q9P281 2608 aa13.13□□□□□ -0.31
DDB1-216ENST00000539739 A0A1B0GWJ7 208 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 H3BUI4 141 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 OVOL3O00110 214 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 MLNRO43193 412 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 ADH4P08319 380 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 CD36P16671 472 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 DNASE1P24855 282 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 CDKN1AP38936 164 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 VBP1P61758 197 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 RIN1Q13671 783 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 Q3ZCU0 254 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 TOR2AQ5JU69 321 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 PLCXD3Q63HM9 321 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 UNQ9370/PRO34162Q6UXP9 181 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 UTS2BQ765I0 119 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 CEACAM19Q7Z692 300 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 NOXA1Q86UR1 476 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 ZCCHC24Q8N2G6 241 aaKnown RBP13.12□□□□□ -0.31
DDB1-216ENST00000539739 PHYHIPQ92561 330 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 TRMT61AQ96FX7 289 aaKnown RBP13.12□□□□□ -0.31
DDB1-216ENST00000539739 DERL3Q96Q80 235 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 EGLN1Q9GZT9 426 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 ZCCHC4Q9H5U6 513 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 GPR173Q9NS66 373 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 C14orf119Q9NWQ9 140 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 CKLFQ9UBR5 152 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 SLC7A11Q9UPY5 501 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 ARFGEF3Q5TH69 2177 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 NBPF19A0A087WUL8 3843 aa13.12□□□□□ -0.31
DDB1-216ENST00000539739 HMX3A6NHT5 357 aa13.11□□□□□ -0.31
DDB1-216ENST00000539739 H0YL77 283 aa13.11□□□□□ -0.31
DDB1-216ENST00000539739 GATCO43716 136 aaKnown RBP13.11□□□□□ -0.31
DDB1-216ENST00000539739 GALP22466 123 aa13.11□□□□□ -0.31
DDB1-216ENST00000539739 SRP9P49458 86 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms