RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 E7EQL1 145 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 NAT2P11245 290 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 LOXP28300 417 aaPredicted RBP13.77□□□□□ -0.21
TRAF3-204ENST00000539721 ETV6P41212 452 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 HAAOP46952 286 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 EVX1P49640 407 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 ZNF846Q147U1 533 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 NKPD1Q17RQ9 610 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 OR10K2Q6IF99 312 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 C1QL2Q7Z5L3 287 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 CALHM1Q8IU99 346 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 FAM222BQ8WU58 562 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 WDR12Q9GZL7 423 aaKnown RBP13.77□□□□□ -0.21
TRAF3-204ENST00000539721 NKIRAS2Q9NYR9 191 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 EXTL2Q9UBQ6 330 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 GHRLQ9UBU3 117 aa13.77□□□□□ -0.21
TRAF3-204ENST00000539721 ADGRG4Q8IZF6 3080 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 LDLRAD4O15165 306 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 ANGPTL7O43827 346 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 VSIG8P0DPA2 414 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 TALDO1P37837 337 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 ALDH3B1P43353 468 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 EFNB2P52799 333 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 PDZK1IP1Q13113 114 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 MADCAM1Q13477 382 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 ZNF573Q86YE8 665 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 CMTM4Q8IZR5 234 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 ZNF611Q8N823 705 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 SPERTQ8NA61 448 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 GTF3AQ92664 365 aaKnown RBP13.76□□□□□ -0.21
TRAF3-204ENST00000539721 CXXC4Q9H2H0 198 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 CYSLTR2Q9NS75 346 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 PLCE1Q9P212 2302 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 FABP12A6NFH5 140 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 F5H5P2 479 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 IGFBP2P18065 325 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 ZNF45Q02386 682 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 SLC22A6Q4U2R8 563 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 FAM131AQ6UXB0 335 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 OR2W3Q7Z3T1 314 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 DTX3Q8N9I9 347 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 OR2Z1Q8NG97 314 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 OR4M1Q8NGD0 313 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 OR10K1Q8NGX5 313 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 RAB40AQ8WXH6 277 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 FAM46BQ96A09 425 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 PTX4Q96A99 478 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 C1orf147Q96MC9 270 aaPredicted RBP13.76□□□□□ -0.21
TRAF3-204ENST00000539721 TMEM204Q9BSN7 226 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 METTL9Q9H1A3 318 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 ABCG5Q9H222 651 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 C14orf119Q9NWQ9 140 aa13.76□□□□□ -0.21
TRAF3-204ENST00000539721 A0A1B0GWJ7 208 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 ZSCAN5BA6NJL1 495 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 TMEM210A6NLX4 147 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 TMEM14DPA8MWL7 114 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 CRTAPO75718 401 aaPredicted RBP13.75□□□□□ -0.21
TRAF3-204ENST00000539721 RAB6AP20340 208 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 SERPINA2P20848 420 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 SERPINF1P36955 418 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 QRFPP83859 136 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 MZT1Q08AG7 82 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 UNC119Q13432 240 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 RSU1Q15404 277 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 HAGHLQ6PII5 290 aaPredicted RBP13.75□□□□□ -0.21
TRAF3-204ENST00000539721 MEX3BQ6ZN04 569 aaKnown RBP13.75□□□□□ -0.21
TRAF3-204ENST00000539721 SLC25A26Q70HW3 274 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 WDR86Q86TI4 376 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 PXT1Q8NFP0 134 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 OR51F2Q8NH61 342 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 KCNG3Q8TAE7 436 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 S100A16Q96FQ6 103 aaKnown RBP13.75□□□□□ -0.21
TRAF3-204ENST00000539721 GAL3ST1Q99999 423 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 CST11Q9H112 138 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 ATG5Q9H1Y0 275 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 OR51I2Q9H344 312 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 CISD1Q9NZ45 108 aaKnown RBP13.75□□□□□ -0.21
TRAF3-204ENST00000539721 FBLN5Q9UBX5 448 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 RAB22AQ9UL26 194 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 V9GYH0 126 aa13.75□□□□□ -0.21
TRAF3-204ENST00000539721 CHD6Q8TD26 2715 aa13.74□□□□□ -0.21
TRAF3-204ENST00000539721 LRP5LA4QPB2 252 aa13.74□□□□□ -0.21
TRAF3-204ENST00000539721 MPIG6BO95866 241 aa13.74□□□□□ -0.21
TRAF3-204ENST00000539721 CYB5AP00167 134 aa13.74□□□□□ -0.21
TRAF3-204ENST00000539721 APOBEC3AP31941 199 aaPredicted RBP13.74□□□□□ -0.21
TRAF3-204ENST00000539721 ZNF81P51508 661 aa13.74□□□□□ -0.21
TRAF3-204ENST00000539721 SRSF1Q07955 248 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRAF3-204ENST00000539721 IL18Q14116 193 aa13.74□□□□□ -0.21
TRAF3-204ENST00000539721 ZNF672Q499Z4 452 aaPredicted RBP13.74□□□□□ -0.21
TRAF3-204ENST00000539721 METAP1DQ6UB28 335 aaPredicted RBP13.74□□□□□ -0.21
TRAF3-204ENST00000539721 ASCL4Q6XD76 172 aa13.74□□□□□ -0.21
TRAF3-204ENST00000539721 MKXQ8IYA7 352 aa13.74□□□□□ -0.21
TRAF3-204ENST00000539721 ZSCAN4Q8NAM6 433 aaPredicted RBP13.74□□□□□ -0.21
TRAF3-204ENST00000539721 LILRB1Q8NHL6 650 aaPredicted RBP13.74□□□□□ -0.21
TRAF3-204ENST00000539721 BANF2Q9H503 90 aa13.74□□□□□ -0.21
TRAF3-204ENST00000539721 CXorf56Q9H5V9 222 aa13.74□□□□□ -0.21
TRAF3-204ENST00000539721 KLF2Q9Y5W3 355 aaPredicted RBP13.74□□□□□ -0.21
TRAF3-204ENST00000539721 IGKV1-12A0A0C4DH73 117 aa13.73□□□□□ -0.21
TRAF3-204ENST00000539721 A0A1W2PP11 408 aa13.73□□□□□ -0.21
TRAF3-204ENST00000539721 J3QRK9 145 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms