RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-215	ENST00000539712	SIGLEC5	O15389	551 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	NDUFB3	O43676	98 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	DHRS3	O75911	302 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	HTR1F	P30939	366 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	DLX1	P56177	255 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	EGR3	Q06889	387 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	MOB3C	Q70IA8	216 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	VMO1	Q7Z5L0	202 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	GID4	Q8IVV7	300 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	OR51G2	Q8NGK0	314 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	OR14K1	Q8NGZ2	314 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	GATAD2B	Q8WXI9	593 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	UBE2F	Q969M7	185 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	ZDHHC16	Q969W1	377 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	RNF166	Q96A37	237 aa	Predicted RBP	13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	ACOXL	Q9NUZ1	547 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	NLK	Q9UBE8	527 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	DNAJB11	Q9UBS4	358 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	WARS2	Q9UGM6	360 aa	Known RBP	13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	OR52A1	Q9UKL2	312 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	SLC22A13	Q9Y226	551 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712	MAB21L2	Q9Y586	359 aa		13.79	□□□□□ -0.2
DDB1-215	ENST00000539712		A0A0U1RQK1	487 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712		A0A1W2PQL4	384 aa	Predicted RBP	13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	SAC3D1	A6NKF1	404 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	ZNF670-ZNF695	F2Z2N8	137 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712		H3BNX3	289 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	APOL3	O95236	402 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	PSG2	P11465	335 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	CCL1	P22362	96 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	GLRA1	P23415	457 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	IL13RA1	P78552	427 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	PRB3	Q04118	309 aa	Predicted RBP	13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	LRRC10	Q5BKY1	277 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	HAGHL	Q6PII5	290 aa	Predicted RBP	13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	THAP5	Q7Z6K1	395 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	COMMD2	Q86X83	199 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	PDZD9	Q8IXQ8	264 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	PYDC1	Q8WXC3	89 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	TNFRSF14	Q92956	283 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	EME1	Q96AY2	570 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	CHIA	Q9BZP6	476 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	MOB1A	Q9H8S9	216 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	ENOPH1	Q9UHY7	261 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712	ENPP5	Q9UJA9	477 aa		13.78	□□□□□ -0.2
DDB1-215	ENST00000539712		A0A1B0GVI7	797 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	PQLC2L	A1A4F0	135 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	FAM181B	A6NEQ2	426 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712		A6NIN4	97 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	SYNGR1	O43759	233 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	NRAS	P01111	189 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	CAV3	P56539	151 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	RELB	Q01201	579 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	BCL2L15	Q5TBC7	163 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	PLCXD3	Q63HM9	321 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	METAP1D	Q6UB28	335 aa	Predicted RBP	13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	KIR3DL3	Q8N743	410 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	ZNRF1	Q8ND25	227 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	OR8J1	Q8NGP2	316 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	RORB	Q92753	470 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	TMIGD2	Q96BF3	282 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	SDSL	Q96GA7	329 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	MED30	Q96HR3	178 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	ZNF488	Q96MN9	340 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	TBX5	Q99593	518 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	RIBC2	Q9H4K1	309 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	UNKL	Q9H9P5	680 aa	Known RBP	13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	ONECUT1	Q9UBC0	465 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	SNX5	Q9Y5X3	404 aa		13.77	□□□□□ -0.21
DDB1-215	ENST00000539712	RNASEK-C17orf49	H0YIS7	233 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	DLGAP1	O14490	977 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	MTRF1	O75570	445 aa	Known RBP	13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	ALPL	P05186	524 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	OR2T7	P0C7T2	308 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	MDK	P21741	143 aa	Predicted RBP	13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	OMG	P23515	440 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	ACTR3	P61158	418 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	CLVS2	Q5SYC1	327 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	SHISA2	Q6UWI4	295 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	ACP7	Q6ZNF0	438 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	C1orf122	Q6ZSJ8	110 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	CATSPERD	Q86XM0	798 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	TMEM86B	Q8N661	226 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	CD177	Q8N6Q3	437 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	POC1A	Q8NBT0	407 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	OR2T27	Q8NH04	317 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	SGMS2	Q8NHU3	365 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	ZNF671	Q8TAW3	534 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	ELL3	Q9HB65	397 aa	Predicted RBP	13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	SIRT7	Q9NRC8	400 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	GPR173	Q9NS66	373 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	TNFRSF19	Q9NS68	423 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	GTF2A1L	Q9UNN4	478 aa		13.76	□□□□□ -0.21
DDB1-215	ENST00000539712	NKX6-3	A6NJ46	265 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	DHRS7C	A6NNS2	312 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	NOS1AP	O75052	506 aa	Predicted RBP	13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	CIB2	O75838	187 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	RPP14	O95059	124 aa	Known RBP	13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	IGHV4-59	P01825	116 aa		13.75	□□□□□ -0.21

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