RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 V9GYS6 101 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 ADAMTS20P59510 1910 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 VCANP13611 3396 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 UNC13CQ8NB66 2214 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 TRBV11-1A0A0K0K1C0 115 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 A0A1W2PNR3 127 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 C5orf63A6NC05 138 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 CRYM-AS1A6NIL9 109 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 AGPAT2O15120 278 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 OPN1LWP04000 364 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 HEXBP07686 556 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 ZNF43P17038 809 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 CPT2P23786 658 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 TMEM33P57088 247 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 NXPH1P58417 271 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 SMAD2Q15796 467 aaKnown RBP8.48□□□□□ -1.05
CDH13-204ENST00000539548 UBE2V2Q15819 145 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 SWI5Q1ZZU3 235 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 RHBDD2Q6NTF9 364 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 Q6ZRG5 221 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 RABEPKQ7Z6M1 372 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 SULF2Q8IWU5 870 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 ZFP82Q8N141 532 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 OR5D18Q8NGL1 313 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 PP6455Q8WZ26 134 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 IGKV1D-8A0A087WSZ0 117 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 C2CD4DB7Z1M9 353 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 TLX3O43711 291 aaPredicted RBP8.47□□□□□ -1.05
CDH13-204ENST00000539548 EIF3GO75821 320 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDH13-204ENST00000539548 DHRS3O75911 302 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 PIAS2O75928 621 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 OR8U9P0C7N5 309 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 FCGR2AP12318 317 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 SERPINA2P20848 420 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 PTAFRP25105 342 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 FKBP2P26885 142 aaKnown RBP8.47□□□□□ -1.05
CDH13-204ENST00000539548 HGFACQ04756 655 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 GGNBP1Q5YKI7 109 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 WDR74Q6RFH5 385 aaPredicted RBP8.47□□□□□ -1.05
CDH13-204ENST00000539548 TDHQ8IZJ6 230 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 CCDC54Q8NEL0 328 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 OR2M3Q8NG83 312 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 OR9K2Q8NGE7 335 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 OR8U1Q8NH10 309 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 HAS2Q92819 552 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 S100A13Q99584 98 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 ZNF2Q9BSG1 426 aaPredicted RBP8.47□□□□□ -1.05
CDH13-204ENST00000539548 TUBA4BQ9H853 241 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 ZNF160Q9HCG1 818 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 FAM212BQ9NTI7 297 aaPredicted RBP8.47□□□□□ -1.05
CDH13-204ENST00000539548 MCTS1Q9ULC4 181 aaKnown RBP8.47□□□□□ -1.05
CDH13-204ENST00000539548 NCOA6Q14686 2063 aaPredicted RBP8.47□□□□□ -1.05
CDH13-204ENST00000539548 PRUNE2Q8WUY3 3088 aa8.47□□□□□ -1.05
CDH13-204ENST00000539548 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.46□□□□□ -1.05
CDH13-204ENST00000539548 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.46□□□□□ -1.05
CDH13-204ENST00000539548 AQP7P3A6NL99 342 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 DHRS7CA6NNS2 312 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 C1orf196B1AJZ1 125 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 RAMP1O60894 148 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 GLB1P16278 677 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 ID4P47928 161 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 RAB30Q15771 203 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 DMRTC1Q5HYR2 192 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 GJC3Q8NFK1 279 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 CADM4Q8NFZ8 388 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 NPRL2Q8WTW4 380 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 SECTM1Q8WVN6 248 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 HIST1H2BAQ96A08 127 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 MRPL24Q96A35 216 aaKnown RBP8.46□□□□□ -1.05
CDH13-204ENST00000539548 C10orf35Q96D05 121 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 C14orf79Q96F83 325 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 AKR1E2Q96JD6 320 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 CLCC1Q96S66 551 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 WDR77Q9BQA1 342 aaPredicted RBP8.46□□□□□ -1.05
CDH13-204ENST00000539548 SCRT1Q9BWW7 348 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 CHST5Q9GZS9 411 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 METTL7AQ9H8H3 244 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 ZNF701Q9NV72 531 aaPredicted RBP8.46□□□□□ -1.05
CDH13-204ENST00000539548 PADI1Q9ULC6 663 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 EDARQ9UNE0 448 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 HDGFL3Q9Y3E1 203 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 MYO7BQ6PIF6 2116 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 ASXL3Q9C0F0 2248 aa8.46□□□□□ -1.05
CDH13-204ENST00000539548 C5orf52A6NGY3 159 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 E5RGE8 158 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 TSPAN15O95858 294 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 MT-ND4LP03901 98 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 ACAA1P09110 424 aaPredicted RBP8.46□□□□□ -1.06
CDH13-204ENST00000539548 SEC11BP0C7V7 166 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 NR2C1P13056 603 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 MSR1P21757 451 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 SNCAP37840 140 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 ZNF133P52736 654 aaPredicted RBP8.46□□□□□ -1.06
CDH13-204ENST00000539548 SNRPEP62304 92 aaKnown RBP8.46□□□□□ -1.06
CDH13-204ENST00000539548 HIST1H3AP68431 136 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 SLC35A1P78382 337 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 RSPO1Q2MKA7 263 aaPredicted RBP8.46□□□□□ -1.06
CDH13-204ENST00000539548 HIST2H3PS2Q5TEC6 136 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 FAM69BQ5VUD6 431 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 HIST2H3AQ71DI3 136 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms