RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 OR2S2Q9NQN1 319 aa1.48□□□□□ -2.17
CCDC7-209ENST00000539197 PEF1Q9UBV8 284 aaKnown RBP1.48□□□□□ -2.17
CCDC7-209ENST00000539197 COMMD3-BMI1R4GMX3 469 aa1.48□□□□□ -2.17
CCDC7-209ENST00000539197 BAHCC1Q9P281 2608 aa1.48□□□□□ -2.17
CCDC7-209ENST00000539197 A0A0A6YYD5 115 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 LOC100653049A0A140TA62 436 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 A0A1W2PRD5 423 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 SLC19A2O60779 497 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 KRT34O76011 436 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 KCNK2O95069 426 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 FARS2O95363 451 aaKnown RBP1.47□□□□□ -2.17
CCDC7-209ENST00000539197 TRBV12-3P01733 135 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 PMCHP20382 165 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 GABRR2P28476 465 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 PRSS3P35030 304 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 GPR1P46091 355 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 AP1S2P56377 157 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 CLDN18P56856 261 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 KLF3P57682 345 aaPredicted RBP1.47□□□□□ -2.17
CCDC7-209ENST00000539197 LCN2P80188 198 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 ZNF33AQ06730 810 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 DNAJC3Q13217 504 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 TFDP2Q14188 446 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 WDR43Q15061 677 aaKnown RBP eCLIP1.47□□□□□ -2.17
CCDC7-209ENST00000539197 SLC9A3R2Q15599 337 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 TSC22D1Q15714 1073 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 ZNF678Q5SXM1 525 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 HHATQ5VTY9 493 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 FAM104BQ5XKR9 115 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 RWDD4Q6NW29 188 aaKnown RBP1.47□□□□□ -2.17
CCDC7-209ENST00000539197 LINC00523Q86TU6 105 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 PDPNQ86YL7 162 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 INO80EQ8NBZ0 244 aaPredicted RBP1.47□□□□□ -2.17
CCDC7-209ENST00000539197 OR1S1Q8NH92 325 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 SFXN5Q8TD22 340 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 PIH1D2Q8WWB5 315 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 RAB1CQ92928 201 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 S100PBPQ96BU1 408 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 YIPF6Q96EC8 236 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 SNF8Q96H20 258 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 C9orf72Q96LT7 481 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 OPALINQ96PE5 141 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 ALS2CR12Q96Q35 445 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 NAA50Q9GZZ1 169 aaKnown RBP1.47□□□□□ -2.17
CCDC7-209ENST00000539197 DSN1Q9H410 356 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 FBXO44Q9H4M3 255 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 RGCCQ9H4X1 137 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 PLEKHF2Q9H8W4 249 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 ZMAT5Q9UDW3 170 aaKnown RBP1.47□□□□□ -2.17
CCDC7-209ENST00000539197 DDX19BQ9UMR2 479 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 CHTOPQ9Y3Y2 248 aaKnown RBP1.47□□□□□ -2.17
CCDC7-209ENST00000539197 PLEKHG2Q9H7P9 1386 aa1.47□□□□□ -2.17
CCDC7-209ENST00000539197 COL11A1P12107 1806 aaPredicted RBP1.46□□□□□ -2.18
CCDC7-209ENST00000539197 MYL12BO14950 172 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 ERI3O43414 337 aaKnown RBP1.46□□□□□ -2.18
CCDC7-209ENST00000539197 MPDU1O75352 247 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 PTHP01270 115 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 IGHG2P01859 326 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 CBR1P16152 277 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 CPN2P22792 545 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 CFHR2P36980 270 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 PSMD4P55036 377 aaKnown RBP1.46□□□□□ -2.18
CCDC7-209ENST00000539197 OR12D2P58182 307 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 FMODQ06828 376 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 TRDNQ13061 729 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 LIN9Q5TKA1 542 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 ZNF470Q6ECI4 717 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 ULK3Q6PHR2 472 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 MRPL21Q7Z2W9 205 aaKnown RBP1.46□□□□□ -2.18
CCDC7-209ENST00000539197 VTCN1Q7Z7D3 282 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 LRRC8AQ8IWT6 810 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 KIF2BQ8N4N8 673 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 OR52K1Q8NGK4 314 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 OR4A15Q8NGL6 344 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 NAT6Q93015 286 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 RBPMSQ93062 196 aaKnown RBP1.46□□□□□ -2.18
CCDC7-209ENST00000539197 TOP1MTQ969P6 601 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 ISOC2Q96AB3 205 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 API5Q9BZZ5 524 aaKnown RBP1.46□□□□□ -2.18
CCDC7-209ENST00000539197 IL22Q9GZX6 179 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 FANCEQ9HB96 536 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 ZC4H2Q9NQZ6 224 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 STX18Q9P2W9 335 aaKnown RBP1.46□□□□□ -2.18
CCDC7-209ENST00000539197 CES1P1Q9UKY3 287 aa1.46□□□□□ -2.18
CCDC7-209ENST00000539197 IGLV10-54A0A075B6I4 117 aa1.45□□□□□ -2.18
CCDC7-209ENST00000539197 LOC102724200A0A096LPH7 203 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-209ENST00000539197 A0A0G2JMP0 313 aa1.45□□□□□ -2.18
CCDC7-209ENST00000539197 A0A0X1KG70 313 aa1.45□□□□□ -2.18
CCDC7-209ENST00000539197 IZUMO1RA6ND01 250 aa1.45□□□□□ -2.18
CCDC7-209ENST00000539197 SDHAF1A6NFY7 115 aa1.45□□□□□ -2.18
CCDC7-209ENST00000539197 SLC22A20A6NK97 555 aa1.45□□□□□ -2.18
CCDC7-209ENST00000539197 C3orf84H3BNL1 204 aa1.45□□□□□ -2.18
CCDC7-209ENST00000539197 BOLA2-SMG1P6H3BVE0 249 aa1.45□□□□□ -2.18
CCDC7-209ENST00000539197 ZNF701M0R085 212 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-209ENST00000539197 TRDMT1O14717 391 aaKnown RBP1.45□□□□□ -2.18
CCDC7-209ENST00000539197 PSPHP1O15172 72 aa1.45□□□□□ -2.18
CCDC7-209ENST00000539197 XRCC2O43543 280 aa1.45□□□□□ -2.18
CCDC7-209ENST00000539197 HSBP1O75506 76 aa1.45□□□□□ -2.18
CCDC7-209ENST00000539197 MBP02144 154 aa1.45□□□□□ -2.18
CCDC7-209ENST00000539197 CATP04040 527 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms