RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 C3orf80F5H4A9 247 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 J3QT63 122 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 FOXH1O75593 365 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 RHBDL1O75783 438 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 GATBO75879 557 aaKnown RBP12.52□□□□□ -0.41
PRPF19-203ENST00000539180 MPZP25189 248 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 GTF2A1P52655 376 aaPredicted RBP12.52□□□□□ -0.41
PRPF19-203ENST00000539180 GBX2P52951 348 aaPredicted RBP12.52□□□□□ -0.41
PRPF19-203ENST00000539180 UBE2V2Q15819 145 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 CR1LQ2VPA4 569 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 CCDC58Q4VC31 144 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 C6orf141Q5SZD1 244 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 FAM120AOSQ5T036 256 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 SFRP4Q6FHJ7 346 aaPredicted RBP12.52□□□□□ -0.41
PRPF19-203ENST00000539180 LYPD2Q6UXB3 125 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 TMPRSS11AQ6ZMR5 421 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 ZNF841Q6ZN19 808 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 UTS2BQ765I0 119 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 C12orf43Q96C57 262 aaKnown RBP12.52□□□□□ -0.41
PRPF19-203ENST00000539180 NEIL1Q96FI4 390 aaPredicted RBP12.52□□□□□ -0.41
PRPF19-203ENST00000539180 TECTBQ96PL2 329 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 PAK1IP1Q9NWT1 392 aaPredicted RBP12.52□□□□□ -0.41
PRPF19-203ENST00000539180 LPAR3Q9UBY5 353 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 MIOXQ9UGB7 285 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 CDC42EP3Q9UKI2 254 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 SVEP1Q4LDE5 3571 aa12.52□□□□□ -0.41
PRPF19-203ENST00000539180 DOCK11Q5JSL3 2073 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 IGKV1-27A0A075B6S5 117 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 IGKV1-9A0A0C4DH69 117 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 FCN3O75636 299 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 MUC1P15941 1255 aaPredicted RBP12.51□□□□□ -0.41
PRPF19-203ENST00000539180 C21orf33P30042 268 aaPredicted RBP12.51□□□□□ -0.41
PRPF19-203ENST00000539180 VHLP40337 213 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 SLC35A2P78381 396 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 LCN2P80188 198 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 PAX2Q02962 417 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 KCNJ8Q15842 424 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 ESCO2Q56NI9 601 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 RNLSQ5VYX0 342 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 STUMQ69YW2 141 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 RPL22L1Q6P5R6 122 aaKnown RBP12.51□□□□□ -0.41
PRPF19-203ENST00000539180 HAGHLQ6PII5 290 aaPredicted RBP12.51□□□□□ -0.41
PRPF19-203ENST00000539180 ZNF676Q8N7Q3 588 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 BOLLQ8N9W6 283 aaKnown RBP12.51□□□□□ -0.41
PRPF19-203ENST00000539180 DEFB108BQ8NET1 73 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 OR8B3Q8NGG8 313 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 SMIM19Q96E16 107 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 SEH1LQ96EE3 360 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 OR8B2Q96RD0 313 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 PDCD1LG2Q9BQ51 273 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 SSBP3Q9BWW4 388 aaPredicted RBP12.51□□□□□ -0.41
PRPF19-203ENST00000539180 ERVK-18Q9QC07 812 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 KAAG1Q9UBP8 84 aa12.51□□□□□ -0.41
PRPF19-203ENST00000539180 SIRT4Q9Y6E7 314 aaPredicted RBP12.51□□□□□ -0.41
PRPF19-203ENST00000539180 IGHV3OR15-7A0A075B7D8 119 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 TRBV2A0A0J9YWF9 115 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 OGG1O15527 345 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 SYNGR1O43759 233 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 CDK1P06493 297 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 RPSAP08865 295 aaKnown RBP12.5□□□□□ -0.41
PRPF19-203ENST00000539180 PGA5P0DJD9 388 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 AMY2BP19961 511 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 PCMT1P22061 227 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 PITPNBP48739 271 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 MED21Q13503 144 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 CNN3Q15417 329 aaKnown RBP12.5□□□□□ -0.41
PRPF19-203ENST00000539180 DMKNQ6E0U4 476 aaPredicted RBP12.5□□□□□ -0.41
PRPF19-203ENST00000539180 ASPHD2Q6ICH7 369 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 NLRC3Q7RTR2 1065 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 CALHM1Q8IU99 346 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 POC1AQ8NBT0 407 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 DNAAF1Q8NEP3 725 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 OR5AK2Q8NH90 309 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 TRMT10AQ8TBZ6 339 aaKnown RBP12.5□□□□□ -0.41
PRPF19-203ENST00000539180 NPRL2Q8WTW4 380 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 SGCDQ92629 289 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 PGLYRP3Q96LB9 341 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 TMPRSS13Q9BYE2 586 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 PKIBQ9C010 78 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 COMMD4Q9H0A8 199 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 WDR13Q9H1Z4 485 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 SMURF1Q9HCE7 757 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 BABAM2Q9NXR7 383 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 RAB26Q9ULW5 256 aa12.5□□□□□ -0.41
PRPF19-203ENST00000539180 A0A0G2JMP0 313 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 A0A0X1KG70 313 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 TRAPPC2LH3BP13 241 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 PHF1O43189 567 aaPredicted RBP12.49□□□□□ -0.41
PRPF19-203ENST00000539180 AKR7A2O43488 359 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 NDUFA2O43678 99 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 NOS1APO75052 506 aaPredicted RBP12.49□□□□□ -0.41
PRPF19-203ENST00000539180 GYPAP02724 150 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 MT-ND2P03891 347 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 ZNF20P17024 532 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 GATA3P23771 443 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 HAAOP46952 286 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 WNT4P56705 351 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 MICBQ29980 383 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 CHRFAM7AQ494W8 412 aa12.49□□□□□ -0.41
PRPF19-203ENST00000539180 WDR25Q64LD2 544 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms