RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 MDP1Q86V88 176 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 CD163Q86VB7 1156 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 CCDC36Q8IYA8 594 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 PXT1Q8NFP0 134 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 OR56B2PQ8NGI1 322 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 OR5M9Q8NGP3 310 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 SNIP1Q8TAD8 396 aaKnown RBP12.8□□□□□ -0.36
ATL3-203ENST00000538786 ST8SIA4Q92187 359 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 SNAPC3Q92966 411 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 PECRQ9BY49 303 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 MYOZ1Q9NP98 299 aaPredicted RBP12.8□□□□□ -0.36
ATL3-203ENST00000538786 PLSCR3Q9NRY6 295 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 IL36GQ9NZH8 169 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 STARD10Q9Y365 291 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 BOLA1Q9Y3E2 137 aa12.8□□□□□ -0.36
ATL3-203ENST00000538786 ZNF850A8MQ14 1090 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 AHRRA9YTQ3 701 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 RGS13O14921 159 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 ZNHIT1O43257 154 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 NGFP01138 241 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 IGHV1-2P23083 117 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 PDZK1IP1Q13113 114 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 PPA1Q15181 289 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 ACTBL2Q562R1 376 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 Q6ZS92 163 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 Q6ZT83 130 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 CSNK2A3Q8NEV1 391 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 OR13C8Q8NGS7 320 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 OR4K15Q8NH41 348 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 ZNF75AQ96N20 296 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 POFUT1Q9H488 388 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 DLL4Q9NR61 685 aa12.79□□□□□ -0.36
ATL3-203ENST00000538786 EIF3KQ9UBQ5 218 aaKnown RBP12.79□□□□□ -0.36
ATL3-203ENST00000538786 PLATP00750 562 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 CST4P01036 141 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 CSN2P05814 226 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 EIF2S3P41091 472 aaKnown RBP12.78□□□□□ -0.36
ATL3-203ENST00000538786 HLXQ14774 488 aaPredicted RBP12.78□□□□□ -0.36
ATL3-203ENST00000538786 ACSF3Q4G176 576 aaPredicted RBP12.78□□□□□ -0.36
ATL3-203ENST00000538786 ATPAF1Q5TC12 328 aaPredicted RBP12.78□□□□□ -0.36
ATL3-203ENST00000538786 OR2A2Q6IF42 318 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 FTMTQ8N4E7 242 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 C9orf106Q8NAJ2 232 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 OR52B4Q8NGK2 314 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 FBXW5Q969U6 566 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 MRPS24Q96EL2 167 aaKnown RBP12.78□□□□□ -0.36
ATL3-203ENST00000538786 PAPOLGQ9BWT3 736 aaKnown RBP12.78□□□□□ -0.36
ATL3-203ENST00000538786 CHST6Q9GZX3 395 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 PCDHB16Q9NRJ7 776 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 MGAT4CQ9UBM8 478 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 GPR160Q9UJ42 338 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 IGKV1-12A0A0C4DH73 117 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 IGKV1D-12P01611 117 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 IFNA6P05013 189 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 GABRR1P24046 479 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 WNT5AP41221 380 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 KIR2DL2P43627 348 aaPredicted RBP12.78□□□□□ -0.36
ATL3-203ENST00000538786 NHLH1Q02575 133 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 SF3B4Q15427 424 aaKnown RBP eCLIP12.78□□□□□ -0.362e-8■■■■■ 37
ATL3-203ENST00000538786 C4orf46Q504U0 113 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 VAX1Q5SQQ9 334 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 NLRC3Q7RTR2 1065 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 SLC30A7Q8NEW0 376 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 OR6K3Q8NGY3 331 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 WBP1Q96G27 269 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 TMEM246Q9BRR3 403 aa12.78□□□□□ -0.36
ATL3-203ENST00000538786 FREM1Q5H8C1 2179 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 PQLC2LA1A4F0 135 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 AKR7A2O43488 359 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 PMP2P02689 132 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 OR4E1P0C645 316 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 UBE2NP61088 152 aaKnown RBP12.77□□□□□ -0.37
ATL3-203ENST00000538786 PRDX4Q13162 271 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 MICBQ29980 383 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 TMED4Q7Z7H5 227 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 HOGA1Q86XE5 327 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 MUC20Q8N307 709 aaPredicted RBP12.77□□□□□ -0.37
ATL3-203ENST00000538786 ZDHHC22Q8N966 263 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 CNEP1R1Q8N9A8 125 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 ZSCAN4Q8NAM6 433 aaPredicted RBP12.77□□□□□ -0.37
ATL3-203ENST00000538786 OR5L1Q8NGL2 311 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 ZNF431Q8TF32 576 aaPredicted RBP12.77□□□□□ -0.37
ATL3-203ENST00000538786 PLEKHJ1Q9NW61 149 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 HSF4Q9ULV5 492 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 RTTNQ86VV8 2226 aa12.77□□□□□ -0.37
ATL3-203ENST00000538786 J3QW42 95 aa12.76□□□□□ -0.37
ATL3-203ENST00000538786 ZNF14P17017 642 aaPredicted RBP12.76□□□□□ -0.37
ATL3-203ENST00000538786 GABRA6Q16445 453 aa12.76□□□□□ -0.37
ATL3-203ENST00000538786 CEACAM21Q3KPI0 293 aa12.76□□□□□ -0.37
ATL3-203ENST00000538786 NSUN5P2Q63ZY6 315 aa12.76□□□□□ -0.37
ATL3-203ENST00000538786 LAMTOR1Q6IAA8 161 aa12.76□□□□□ -0.37
ATL3-203ENST00000538786 NCCRP1Q6ZVX7 275 aaPredicted RBP12.76□□□□□ -0.37
ATL3-203ENST00000538786 C6orf201Q7Z4U5 140 aa12.76□□□□□ -0.37
ATL3-203ENST00000538786 ZDHHC23Q8IYP9 409 aa12.76□□□□□ -0.37
ATL3-203ENST00000538786 OSR2Q8N2R0 312 aa12.76□□□□□ -0.37
ATL3-203ENST00000538786 ARRDC1Q8N5I2 433 aa12.76□□□□□ -0.37
ATL3-203ENST00000538786 ASCC1Q8N9N2 400 aaKnown RBP12.76□□□□□ -0.37
ATL3-203ENST00000538786 OR51F2Q8NH61 342 aa12.76□□□□□ -0.37
ATL3-203ENST00000538786 MRGPRFQ96AM1 343 aa12.76□□□□□ -0.37
ATL3-203ENST00000538786 CYYR1Q96J86 154 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms