RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 ZNRF4Q8WWF5 429 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 RELTQ969Z4 430 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 GNPNAT1Q96EK6 184 aaPredicted RBP10.99□□□□□ -0.65
USP3-203ENST00000538686 OR10A5Q9H207 317 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 WDR76Q9H967 626 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 CISD1Q9NZ45 108 aaKnown RBP10.99□□□□□ -0.65
USP3-203ENST00000538686 HSF4Q9ULV5 492 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 C14orf166Q9Y224 244 aaKnown RBP10.99□□□□□ -0.65
USP3-203ENST00000538686 WIPI2Q9Y4P8 454 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 MRPS18BQ9Y676 258 aaKnown RBP10.99□□□□□ -0.65
USP3-203ENST00000538686 NSG1A0A0A6YYJ2 146 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 TRAV1-1A0A0B4J248 108 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 A0A0B4J2E0 115 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 A0A1B0GX12 115 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 AHRRA9YTQ3 701 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 GPR89AB7ZAQ6 455 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 CTSVO60911 334 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 GPR89BP0CG08 455 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 HSD11B1P28845 292 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 TPPP2P59282 170 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 DMWDQ09019 674 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 GPR18Q14330 331 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 MRPL2Q5T653 305 aaKnown RBP10.99□□□□□ -0.65
USP3-203ENST00000538686 TPTE2P1Q5T6R2 138 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 NBPF12Q5TAG4 269 aaPredicted RBP10.99□□□□□ -0.65
USP3-203ENST00000538686 STPG4Q8N801 248 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 MRGPRX1Q96LB2 322 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 TPSD1Q9BZJ3 242 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 ZBP1Q9H171 429 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 CST9LQ9H4G1 147 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 B3GALT5Q9Y2C3 310 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 LAMTOR2Q9Y2Q5 125 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 OR51B4Q9Y5P0 310 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 A0A1W2PQ45 241 aaPredicted RBP10.98□□□□□ -0.65
USP3-203ENST00000538686 A0A1W2PQY0 241 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 HRASP01112 189 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 PCK2Q16822 640 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 WDR38Q5JTN6 314 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 VWA1Q6PCB0 445 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 CENPVQ7Z7K6 275 aaPredicted RBP10.98□□□□□ -0.65
USP3-203ENST00000538686 OR51G1Q8NGK1 321 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 OR5H2Q8NGV7 314 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 GPX7Q96SL4 187 aaPredicted RBP10.98□□□□□ -0.65
USP3-203ENST00000538686 ULBP3Q9BZM4 244 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 BET1LQ9NYM9 111 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 IL19Q9UHD0 177 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 KLHDC2Q9Y2U9 406 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 PAM16Q9Y3D7 125 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 HEATR5AQ86XA9 2040 aa10.98□□□□□ -0.65
USP3-203ENST00000538686 MDKP21741 143 aaPredicted RBP10.97□□□□□ -0.65
USP3-203ENST00000538686 TNFSF4P23510 183 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 PSMB5P28074 263 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 CORO1AP31146 461 aaKnown RBP10.97□□□□□ -0.65
USP3-203ENST00000538686 GALR1P47211 349 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 CAPZBP47756 277 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 CLDN18P56856 261 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 RAB11AP62491 216 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 ZNF92Q03936 586 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 ZFP36L1Q07352 338 aaKnown RBP10.97□□□□□ -0.65
USP3-203ENST00000538686 MMDQ15546 238 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 CEBPEQ15744 281 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 SLC22A6Q4U2R8 563 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 MFSD12Q6NUT3 480 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 GLB1LQ6UWU2 654 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 RFLNAQ6ZTI6 216 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 CMTM1Q8IZ96 169 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 OR10S1Q8NGN2 331 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 OR14C36Q8NHC7 312 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 TMEM37Q8WXS4 190 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 CNRIP1Q96F85 164 aaPredicted RBP10.97□□□□□ -0.65
USP3-203ENST00000538686 IL17FQ96PD4 163 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 OR6C3Q9NZP0 311 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 A0A1W2PR48 441 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 SYNDIG1LA6NDD5 238 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 PLXNA2O75051 1894 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 LDB3O75112 727 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 SEMA4FO95754 770 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 BPNT1O95861 308 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 TCN2P20062 427 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 ALOX5APP20292 161 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 SRP14P37108 136 aaKnown RBP10.97□□□□□ -0.65
USP3-203ENST00000538686 BLKP51451 505 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 MTCP1P56278 107 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 TAS2R46P59540 309 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 LCN2P80188 198 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 COL4A3Q01955 1670 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 MESP2Q0VG99 397 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 TMEM41BQ5BJD5 291 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 NUP54Q7Z3B4 507 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 CTHRC1Q96CG8 243 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 AGMATQ9BSE5 352 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 MKKSQ9NPJ1 570 aaPredicted RBP10.97□□□□□ -0.65
USP3-203ENST00000538686 TAS2R4Q9NYW5 299 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 PRR13Q9NZ81 148 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 ZNF319Q9P2F9 582 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 FBLN5Q9UBX5 448 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 NAT8Q9UHE5 227 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 CDC42EP3Q9UKI2 254 aa10.97□□□□□ -0.65
USP3-203ENST00000538686 A0A1B0GTH9 108 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 FAM166BA8MTA8 275 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms