RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 OR5AS1Q8N127 324 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 IL22RA1Q8N6P7 574 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 CLRN3Q8NCR9 226 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 MDS2Q8NDY4 140 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 OR13C9Q8NGT0 318 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 GPX8Q8TED1 209 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 FOXRED1Q96CU9 486 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-210ENST00000538120 SEH1LQ96EE3 360 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 NARS2Q96I59 477 aaKnown RBP9.39□□□□□ -0.91
CLIP1-210ENST00000538120 TTTY12Q9BZ98 90 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 SLC25A32Q9H2D1 315 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 SAV1Q9H4B6 383 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-210ENST00000538120 PCDHB16Q9NRJ7 776 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 ABI3Q9P2A4 366 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 KIAA1549Q9HCM3 1950 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 CACNA1HO95180 2353 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 LOC100509620A0A075B734 347 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 WIPF3A6NGB9 483 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 OR5H14A6NHG9 310 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 FAM166BA8MTA8 275 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 SNAPC5O75971 98 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 RAB3DO95716 219 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 AMY2AP04746 511 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 SELLP14151 372 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 MGMTP16455 207 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 GUCA1AP43080 201 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF84P51523 738 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 LINC00518Q8N0U6 118 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 PAQR4Q8N4S7 273 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-210ENST00000538120 OR5D14Q8NGL3 314 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 OR14K1Q8NGZ2 314 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 ABHD3Q8WU67 409 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 FER1L6-AS2Q96M78 137 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 CDRT15L2A8MXV6 281 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 LINC01387J3KSC0 135 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 DBHP09172 617 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 RAB3AP20336 220 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 MAGEA5P43359 124 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 CLDN18P56856 261 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 RSPO4Q2I0M5 234 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-210ENST00000538120 MOGAT2Q3SYC2 334 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 SCGB2B2Q4G0G5 96 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 ATPAF1Q5TC12 328 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-210ENST00000538120 PLXDC2Q6UX71 529 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 MOB3CQ70IA8 216 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 TMEM251Q8N6I4 163 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 OR4S1Q8NGB4 309 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 CPT1CQ8TCG5 803 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 CPNE4Q96A23 557 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-210ENST00000538120 PTX4Q96A99 478 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 FAM71F1Q96KD3 344 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-210ENST00000538120 ADAT1Q9BUB4 502 aaKnown RBP9.38□□□□□ -0.91
CLIP1-210ENST00000538120 F5H5K5 113 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 SP1P08047 785 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 DHRS2Q13268 280 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 UNC119Q13432 240 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 NKPD1Q17RQ9 610 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 PDSS1Q5T2R2 415 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 TMEM88Q6PEY1 159 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 DOK3Q7L591 496 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.38□□□□□ -0.91
CLIP1-210ENST00000538120 TMEM185AQ8NFB2 350 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 PGAM5Q96HS1 289 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 VRK1Q99986 396 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF471Q9BX82 626 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-210ENST00000538120 NKX6-2Q9C056 277 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-210ENST00000538120 SLC6A15Q9H2J7 730 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 TMEM38BQ9NVV0 291 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 CBY1Q9Y3M2 126 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 KNTC1P50748 2209 aa9.38□□□□□ -0.91
CLIP1-210ENST00000538120 RNF222A6NCQ9 220 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 GPR31O00270 319 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 NME2P1O60361 137 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF735P0CB33 412 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 UBBP0CG47 229 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF20P17024 532 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 NME2P22392 152 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 ATP1B3P54709 279 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 RPS27AP62979 156 aaKnown RBP9.37□□□□□ -0.91
CLIP1-210ENST00000538120 UBA52P62987 128 aaKnown RBP9.37□□□□□ -0.91
CLIP1-210ENST00000538120 TCF15Q12870 199 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 Q6ZSR3 168 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 OR2W3Q7Z3T1 314 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 CD163Q86VB7 1156 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 COMMD2Q86X83 199 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 GPR137CQ8N3F9 429 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 SLC22A24Q8N4F4 322 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 OR5M8Q8NGP6 311 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 ALKBH3Q96Q83 286 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-210ENST00000538120 B4GALT7Q9UBV7 327 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 NCOA6Q14686 2063 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF318Q5VUA4 2279 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 IGKV3D-15A0A087WSY6 115 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 IGKV1-9A0A0C4DH69 117 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 ARGFXA6NJG6 315 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 CST2P09228 141 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 VSIG8P0DPA2 414 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF708P17019 499 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 RAB6AP20340 208 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 CRYGSP22914 178 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms