RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 SOX6P35712 828 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 HAAOP46952 286 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 BMXP51813 675 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 GNG3P63215 75 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 EFNB3Q15768 340 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 MPPED2Q15777 294 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 SWI5Q1ZZU3 235 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 OR10K2Q6IF99 312 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 METAP1DQ6UB28 335 aaPredicted RBP13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 Q6ZNX1 250 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 LHFPL2Q6ZUX7 228 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 OR51D1Q8NGF3 324 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 OR10K1Q8NGX5 313 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 LGALS14Q8TCE9 139 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 TNFAIP8L1Q8WVP5 186 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 TECTBQ96PL2 329 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 MICU1Q9BPX6 476 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 RTL8AQ9BWD3 113 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 STEAP1Q9UHE8 339 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 MRPS28Q9Y2Q9 187 aaKnown RBP13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 A0A1W2PP11 408 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 OR5B21A6NL26 309 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 M0R233 179 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 CTDSP2O14595 271 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 SYNGR1O43759 233 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 CD8AP01732 235 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 EVX1P49640 407 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 ATP1B3P54709 279 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 ZNF154Q13106 437 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 ZNF404Q494X3 552 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 HAGHLQ6PII5 290 aaPredicted RBP13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 ZNF826PQ6ZT77 177 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 FBXL14Q8N1E6 418 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 OR6M1Q8NGM8 313 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 C1orf147Q96MC9 270 aaPredicted RBP13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 SORCS2Q96PQ0 1159 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 PSMG3-AS1Q96PY0 264 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 UQCC2Q9BRT2 126 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 C6orf62Q9GZU0 229 aaPredicted RBP13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 NXF2Q9GZY0 626 aaKnown RBP13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 CXXC4Q9H2H0 198 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 OR51I2Q9H344 312 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 NEK6Q9HC98 313 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 SMURF1Q9HCE7 757 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 UFSP2Q9NUQ7 469 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 COMMD3Q9UBI1 195 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 OR5V1Q9UGF6 321 aa13.28□□□□□ -0.28
SFSWAP-206ENST00000537582 VSTM5A8MXK1 200 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 B9A039 149 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 RHBDL1O75783 438 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 DANCRP0C864 163 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 TMEM225BP0DP42 221 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 CALCBP10092 127 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 CFPP27918 469 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 PTGFRP43088 359 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 PSMD7P51665 324 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 EFNB2P52799 333 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 ZNF846Q147U1 533 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 AWAT2Q6E213 333 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 GLIPR1L1Q6UWM5 242 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 SLC25A26Q70HW3 274 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 TGIF2LYQ8IUE0 185 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 C11orf53Q8IXP5 236 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 ZNF295-AS1Q8N0V1 137 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 ZNF611Q8N823 705 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 ITLN1Q8WWA0 313 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 S100ZQ8WXG8 99 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 FAM3DQ96BQ1 224 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 ZNF488Q96MN9 340 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 OR2V2Q96R30 315 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 WDR12Q9GZL7 423 aaKnown RBP13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 SLC22A4Q9H015 551 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 DYNLRB1Q9NP97 96 aa13.27□□□□□ -0.29
SFSWAP-206ENST00000537582 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 C17orf100A8MU93 164 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 F8VVB4 439 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 F8VWA3 439 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 HPGDSO60760 199 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 CCL8P80075 99 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 TNFAIP6P98066 277 aaPredicted RBP13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 PDZK1IP1Q13113 114 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 MADCAM1Q13477 382 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 C2orf76Q3KRA6 126 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 C11orf71Q6IPW1 123 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 BIVMQ86UB2 503 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 LAX1Q8IWV1 398 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 CDH26Q8IXH8 852 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 SCCPDHQ8NBX0 429 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 ZNF671Q8TAW3 534 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 FAM46BQ96A09 425 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 SLAMF9Q96A28 289 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 PPP1R14BQ96C90 147 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 FOXRED1Q96CU9 486 aaPredicted RBP13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 MEGF10Q96KG7 1140 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 GAL3ST1Q99999 423 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 MIXL1Q9H2W2 232 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 CLEC4MQ9H2X3 399 aaPredicted RBP13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 AKIP1Q9NQ31 210 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 TREM2Q9NZC2 230 aa13.26□□□□□ -0.29
SFSWAP-206ENST00000537582 ING4Q9UNL4 249 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms