RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 C8orf82Q6P1X6 216 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-209ENST00000537178 VWA1Q6PCB0 445 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 FBXL14Q8N1E6 418 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 OR11G2Q8NGC1 345 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 PRSS3P2Q8NHM4 247 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 HMGCLL1Q8TB92 370 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 TRMT61AQ96FX7 289 aaKnown RBP9.56□□□□□ -0.88
CLIP1-209ENST00000537178 GRAMD2BQ96HH9 432 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 FOXB1Q99853 325 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 ZNF391Q9UJN7 358 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 PLXNB2O15031 1838 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 CROCCQ5TZA2 2017 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 ZNF716A6NP11 495 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 F5H697 171 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 FPR2P25090 351 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 SLC6A1P30531 599 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 IGFBP7Q16270 282 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 ZDHHC22Q8N966 263 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 MAP6Q96JE9 813 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 SPNS1Q9H2V7 528 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 KLK11Q9UBX7 282 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 AKR7A2O43488 359 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 RBP4P02753 201 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 ZGLP1P0C6A0 271 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 HIST1H3AP68431 136 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 ETFDHQ16134 617 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 DGAT2L7PQ6IED9 249 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 RNASEKQ6P5S7 137 aaKnown RBP9.55□□□□□ -0.88
CLIP1-209ENST00000537178 OR8B4Q96RC9 309 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 SLC17A5Q9NRA2 495 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-209ENST00000537178 POMT2Q9UKY4 750 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 CRYABP02511 175 aaKnown RBP9.55□□□□□ -0.88
CLIP1-209ENST00000537178 GYPAP02724 150 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 FAM87AP0C7U9 286 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 NAT2P11245 290 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 EPHA2P29317 976 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 RFC3P40938 356 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 PCBP3P57721 371 aaKnown RBP9.55□□□□□ -0.88
CLIP1-209ENST00000537178 KIRREL2Q6UWL6 708 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 NOXO1Q8NFA2 376 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 YIPF6Q96EC8 236 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 DERL3Q96Q80 235 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 RASL12Q9NYN1 266 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 GBF1Q92538 1859 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 A0A087WUJ7 227 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 TNFSF11O14788 317 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 FOXF1Q12946 379 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 Q56UQ5 140 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 OR1F12Q8NHA8 337 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 AKR7LQ8NHP1 331 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 CLDN23Q96B33 292 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 SPACA9Q96E40 222 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-209ENST00000537178 THYN1Q9P016 225 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 ING1Q9UK53 422 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-209ENST00000537178 A4GNTQ9UNA3 340 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 F5P12259 2224 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 ASXL3Q9C0F0 2248 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 OR2T8A6NH00 312 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 TMEM241Q24JQ0 296 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 MICBQ29980 383 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 CLLU1Q5K131 121 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 NUDT8Q8WV74 236 aa9.55□□□□□ -0.88
CLIP1-209ENST00000537178 PLEKHB1Q9UF11 243 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-209ENST00000537178 KLK8O60259 260 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 SLC25A5P05141 298 aaKnown RBP9.54□□□□□ -0.88
CLIP1-209ENST00000537178 CRYBA1P05813 215 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 SFTA3P0C7M3 94 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 CSF2RBP32927 897 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 TMEM183BQ1AE95 376 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 DEFB109BQ30KR1 87 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 FAM209AQ5JX71 171 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 ZBTB37Q5TC79 503 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 OR2W3Q7Z3T1 314 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 ANKRD53Q8N9V6 530 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 FBXO17Q96EF6 278 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 MFRPQ9BY79 579 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 MYOZ1Q9NP98 299 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-209ENST00000537178 ZNF207O43670 478 aaKnown RBP9.54□□□□□ -0.88
CLIP1-209ENST00000537178 HTR1DP28221 377 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 CD200P41217 278 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 RAB7AP51149 207 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 DSCR4P56555 118 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-209ENST00000537178 MIDNQ504T8 468 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 ACSM6Q6P461 480 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 GLDNQ6ZMI3 551 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-209ENST00000537178 BTLAQ7Z6A9 289 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 OTOSQ8NHW6 89 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 ALKBH3Q96Q83 286 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-209ENST00000537178 FOXQ1Q9C009 403 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 OR1A1Q9P1Q5 309 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 ICAM5Q9UMF0 924 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 IGHV3-15A0A0B4J1V0 119 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 A0A1W2PN81 502 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 PYCARD-AS1I3L0S3 204 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 SPRY1O43609 319 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-209ENST00000537178 GATCO43716 136 aaKnown RBP9.54□□□□□ -0.88
CLIP1-209ENST00000537178 AVPR2P30518 371 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 CHRNA7P36544 502 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 FFAR4Q5NUL3 377 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms