RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 DCTN2Q13561 401 aaKnown RBP10.14□□□□□ -0.79
CHD4-203ENST00000535717 ZMYND11Q15326 602 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 TBCEQ15813 527 aaPredicted RBP10.14□□□□□ -0.79
CHD4-203ENST00000535717 FAM201AQ5SY85 155 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 WDR82Q6UXN9 313 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 UTS2BQ765I0 119 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 PEG10Q86TG7 708 aaKnown RBP10.14□□□□□ -0.79
CHD4-203ENST00000535717 SCCPDHQ8NBX0 429 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 NPRL2Q8WTW4 380 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 C18orf12Q96KH6 178 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 MRPS26Q9BYN8 205 aaKnown RBP10.14□□□□□ -0.79
CHD4-203ENST00000535717 NARFLQ9H6Q4 476 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 METTL17Q9H7H0 456 aaPredicted RBP10.14□□□□□ -0.79
CHD4-203ENST00000535717 ZNF696Q9H7X3 374 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 RNF7Q9UBF6 113 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 PAIP2BQ9ULR5 123 aaKnown RBP10.14□□□□□ -0.79
CHD4-203ENST00000535717 MED13LQ71F56 2210 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 MTORP42345 2549 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 CSPG4Q6UVK1 2322 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 TRBV5-5A0A0J9YX44 114 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 FAM230AA0A1W2PPH8 454 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 hCG_1807616A0A1W2PRN6 198 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 LHBP01229 141 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 OCM2P0CE71 109 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 SMIM18P0DKX4 95 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 FOSL1P15407 271 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 ATF1P18846 271 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 IL2RGP31785 369 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 FUT6P51993 359 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 CHN2P52757 468 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 BTG1P62324 171 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 EMX1Q04741 257 aaPredicted RBP10.13□□□□□ -0.79
CHD4-203ENST00000535717 YIF1BQ5BJH7 314 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 ASPHD2Q6ICH7 369 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 LRRC28Q86X40 367 aaPredicted RBP10.13□□□□□ -0.79
CHD4-203ENST00000535717 C1orf87Q8N0U7 546 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 SPARTQ8N0X7 666 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 PARP16Q8N5Y8 322 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 GCSAMQ8N6F7 178 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 BOLLQ8N9W6 283 aaKnown RBP10.13□□□□□ -0.79
CHD4-203ENST00000535717 OR13C9Q8NGT0 318 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 CLDND2Q8NHS1 167 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 TRMT10AQ8TBZ6 339 aaKnown RBP10.13□□□□□ -0.79
CHD4-203ENST00000535717 TECTBQ96PL2 329 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 ZCCHC4Q9H5U6 513 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 ISYNA1Q9NPH2 558 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 ACOT13Q9NPJ3 140 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 SLC7A11Q9UPY5 501 aa10.13□□□□□ -0.79
CHD4-203ENST00000535717 IGKV1-27A0A075B6S5 117 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 PPIAL4EA0A075B759 164 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 ISPDA4D126 451 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 PPIAL4DF5H284 164 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 C3orf80F5H4A9 247 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 PFDN1O60925 122 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 RHBDL1O75783 438 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 INHBBP09529 407 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 HSMCR30P0CW71 290 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 PPIAL4FP0DN26 164 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 EGR1P18146 543 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 CD80P33681 288 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 CFHR2P36980 270 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 HAAOP46952 286 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 LMO4P61968 165 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 TPBGQ13641 420 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 CNN3Q15417 329 aaKnown RBP10.12□□□□□ -0.79
CHD4-203ENST00000535717 KCTD21Q4G0X4 260 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 LIPKQ5VXJ0 399 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 HAGHLQ6PII5 290 aaPredicted RBP10.12□□□□□ -0.79
CHD4-203ENST00000535717 ZNF773Q6PK81 442 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 ZNF367Q7RTV3 350 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 ANGPTL5Q86XS5 388 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 ZNF573Q86YE8 665 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 SERPINA12Q8IW75 414 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 SVOPQ8N4V2 548 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 C19orf18Q8NEA5 215 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 OR5D14Q8NGL3 314 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 LRRC29Q8WV35 223 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 AQP3Q92482 292 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 TMEM106AQ96A25 262 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 OPALINQ96PE5 141 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 MGLLQ99685 303 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 TMEM165Q9HC07 324 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 PPIAL4AQ9Y536 164 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 YLPM1P49750 1951 aaKnown RBP10.12□□□□□ -0.79
CHD4-203ENST00000535717 ABCA2Q9BZC7 2435 aa10.12□□□□□ -0.79
CHD4-203ENST00000535717 TRBV5-7A0A0A0MS05 114 aa10.11□□□□□ -0.79
CHD4-203ENST00000535717 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.11□□□□□ -0.79
CHD4-203ENST00000535717 SYNGR1O43759 233 aa10.11□□□□□ -0.79
CHD4-203ENST00000535717 FSTL3O95633 263 aa10.11□□□□□ -0.79
CHD4-203ENST00000535717 CD2P06729 351 aa10.11□□□□□ -0.79
CHD4-203ENST00000535717 CPEP16870 476 aa10.11□□□□□ -0.79
CHD4-203ENST00000535717 PCMT1P22061 227 aa10.11□□□□□ -0.79
CHD4-203ENST00000535717 PRKACBP22694 351 aa10.11□□□□□ -0.79
CHD4-203ENST00000535717 AZGP1P25311 298 aaKnown RBP10.11□□□□□ -0.79
CHD4-203ENST00000535717 MDH2P40926 338 aaKnown RBP10.11□□□□□ -0.79
CHD4-203ENST00000535717 MLLT11Q13015 90 aaPredicted RBP10.11□□□□□ -0.79
CHD4-203ENST00000535717 CBX3Q13185 183 aa10.11□□□□□ -0.79
CHD4-203ENST00000535717 GPR50Q13585 617 aa10.11□□□□□ -0.79
CHD4-203ENST00000535717 TMEM249Q2WGJ8 235 aa10.11□□□□□ -0.79
CHD4-203ENST00000535717 Q499Y3 187 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms