RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 TSEN15Q8WW01 171 aaKnown RBP11.73□□□□□ -0.53
VPS11-205ENST00000534551 ERGIC1Q969X5 290 aa11.73□□□□□ -0.53
VPS11-205ENST00000534551 ORAI1Q96D31 301 aa11.73□□□□□ -0.53
VPS11-205ENST00000534551 SPACA5Q96QH8 159 aa11.73□□□□□ -0.53
VPS11-205ENST00000534551 OR5M11Q96RB7 305 aa11.73□□□□□ -0.53
VPS11-205ENST00000534551 NKX3-1Q99801 234 aaPredicted RBP11.73□□□□□ -0.53
VPS11-205ENST00000534551 COMMD4Q9H0A8 199 aa11.73□□□□□ -0.53
VPS11-205ENST00000534551 TMEM165Q9HC07 324 aa11.73□□□□□ -0.53
VPS11-205ENST00000534551 ABCB9Q9NP78 766 aa11.73□□□□□ -0.53
VPS11-205ENST00000534551 TRIM36Q9NQ86 728 aa11.73□□□□□ -0.53
VPS11-205ENST00000534551 SNTG1Q9NSN8 517 aa11.73□□□□□ -0.53
VPS11-205ENST00000534551 CHCHD3Q9NX63 227 aaKnown RBP11.73□□□□□ -0.53
VPS11-205ENST00000534551 CTSZQ9UBR2 303 aa11.73□□□□□ -0.53
VPS11-205ENST00000534551 PPIAL4AQ9Y536 164 aa11.73□□□□□ -0.53
VPS11-205ENST00000534551 PQLC2LA1A4F0 135 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 OOEPA6NGQ2 149 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 F5H0A9 414 aaPredicted RBP11.72□□□□□ -0.53
VPS11-205ENST00000534551 PHF1O43189 567 aaPredicted RBP11.72□□□□□ -0.53
VPS11-205ENST00000534551 FCN3O75636 299 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 TGFAP01135 160 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 RPS2P15880 293 aaKnown RBP11.72□□□□□ -0.53
VPS11-205ENST00000534551 WNT4P56705 351 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 LCN2P80188 198 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 IRF3Q14653 427 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 TMEM155Q4W5P6 130 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 ANGPTL5Q86XS5 388 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 FAM90A1Q86YD7 464 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 SPICQ8N5J4 248 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 NANOGP1Q8N7R0 232 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 LINC01356Q8N9X3 169 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 RFT1Q96AA3 541 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 RAB39BQ96DA2 213 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 SMIM19Q96E16 107 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 C1orf159Q96HA4 380 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 PGLYRP3Q96LB9 341 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 HIST1H2AAQ96QV6 131 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 PATZ1Q9HBE1 687 aaKnown RBP11.72□□□□□ -0.53
VPS11-205ENST00000534551 BABAM2Q9NXR7 383 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 SCN3BQ9NY72 215 aa11.72□□□□□ -0.53
VPS11-205ENST00000534551 LSM2Q9Y333 95 aaKnown RBP11.72□□□□□ -0.53
VPS11-205ENST00000534551 KIAA1324LA8MWY0 1029 aaPredicted RBP11.71□□□□□ -0.53
VPS11-205ENST00000534551 SRRM5B3KS81 715 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 IFNL4K9M1U5 179 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 LGALS8O00214 317 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 OGG1O15527 345 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 LHBP01229 141 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 MSMBP08118 114 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 SELLP14151 372 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 ZFP36P26651 326 aaKnown RBP11.71□□□□□ -0.53
VPS11-205ENST00000534551 MAP2K4P45985 399 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 HAAOP46952 286 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 MRPL28Q13084 256 aaKnown RBP11.71□□□□□ -0.53
VPS11-205ENST00000534551 MED21Q13503 144 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 FAM76BQ5HYJ3 339 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 DMKNQ6E0U4 476 aaPredicted RBP11.71□□□□□ -0.53
VPS11-205ENST00000534551 FAM166AQ6J272 317 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 RPL22L1Q6P5R6 122 aaKnown RBP11.71□□□□□ -0.53
VPS11-205ENST00000534551 OR5T2Q8NGG2 359 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 OR5A2Q8NGI9 324 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 OR51A2Q8NGJ7 313 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 OR13C9Q8NGT0 318 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 AQP3Q92482 292 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 MYCBPQ99417 103 aaPredicted RBP11.71□□□□□ -0.53
VPS11-205ENST00000534551 CCDC90BQ9GZT6 254 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 DUSP21Q9H596 190 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 SMURF1Q9HCE7 757 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 TAS2R4Q9NYW5 299 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 PCDHB10Q9UN67 800 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 DHDHQ9UQ10 334 aa11.71□□□□□ -0.53
VPS11-205ENST00000534551 CUBNO60494 3623 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 A8MV72 311 aaPredicted RBP11.7□□□□□ -0.54
VPS11-205ENST00000534551 J3QT63 122 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 RGS10O43665 173 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 PLPP2O43688 288 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 GATBO75879 557 aaKnown RBP11.7□□□□□ -0.54
VPS11-205ENST00000534551 INMTO95050 263 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 ATF1P18846 271 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 AMY2BP19961 511 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 AZGP1P25311 298 aaKnown RBP11.7□□□□□ -0.54
VPS11-205ENST00000534551 RPS11P62280 158 aaKnown RBP eCLIP11.7□□□□□ -0.54
VPS11-205ENST00000534551 INSL4Q14641 139 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 CRIP3Q6Q6R5 217 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 MUC20Q8N307 709 aaPredicted RBP11.7□□□□□ -0.54
VPS11-205ENST00000534551 FAM216BQ8N7L0 139 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 OR5D18Q8NGL1 313 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 GHSRQ92847 366 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 MYDGFQ969H8 173 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 MND1Q9BWT6 205 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 ERGIC3Q9Y282 383 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 TPRKBQ9Y3C4 175 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 ZFHX3Q15911 3703 aa11.7□□□□□ -0.54
VPS11-205ENST00000534551 MAGEA13PA6NCF6 341 aa11.69□□□□□ -0.54
VPS11-205ENST00000534551 B4DSR2 109 aa11.69□□□□□ -0.54
VPS11-205ENST00000534551 F8VVB4 439 aa11.69□□□□□ -0.54
VPS11-205ENST00000534551 F8VWA3 439 aa11.69□□□□□ -0.54
VPS11-205ENST00000534551 ADAM20O43506 726 aa11.69□□□□□ -0.54
VPS11-205ENST00000534551 ZNF12P17014 697 aa11.69□□□□□ -0.54
VPS11-205ENST00000534551 CELP19835 753 aa11.69□□□□□ -0.54
VPS11-205ENST00000534551 POU3F4P49335 361 aa11.69□□□□□ -0.54
VPS11-205ENST00000534551 CEBPDP49716 269 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms