RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 DCKP27707 260 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 C21orf33P30042 268 aaPredicted RBP11.16□□□□□ -0.62
CMTM1-219ENST00000533953 GBX2P52951 348 aaPredicted RBP11.16□□□□□ -0.62
CMTM1-219ENST00000533953 ZBTB37Q5TC79 503 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 TMEM244Q5VVB8 128 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 IZUMO2Q6UXV1 221 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 ZNF841Q6ZN19 808 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 AHSA2Q719I0 299 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 ZFP41Q8N8Y5 198 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 AQP3Q92482 292 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 NEIL1Q96FI4 390 aaPredicted RBP11.16□□□□□ -0.62
CMTM1-219ENST00000533953 TMPRSS13Q9BYE2 586 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 PLEKHA1Q9HB21 404 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 SMURF1Q9HCE7 757 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 ABCB9Q9NP78 766 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 MIOXQ9UGB7 285 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 PSORS1C1Q9UIG5 152 aa11.16□□□□□ -0.62
CMTM1-219ENST00000533953 DIMT1Q9UNQ2 313 aaKnown RBP11.16□□□□□ -0.62
CMTM1-219ENST00000533953 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.16□□□□□ -0.62
CMTM1-219ENST00000533953 TRAV38-1A0A0B4J264 116 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 IGKV1-9A0A0C4DH69 117 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 TRBV2A0A0J9YWF9 115 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 PTGES3LE9PB15 166 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 FOXH1O75593 365 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 PLATP00750 562 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 UBCP0CG48 685 aaKnown RBP11.15□□□□□ -0.62
CMTM1-219ENST00000533953 SELLP14151 372 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 HAAOP46952 286 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 PITPNBP48739 271 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 CCR9P51686 369 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 GNB2P62879 340 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 SRSF2Q01130 221 aaKnown RBP11.15□□□□□ -0.62
CMTM1-219ENST00000533953 ESCO2Q56NI9 601 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 C6orf141Q5SZD1 244 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 DCAF12L2Q5VW00 463 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 TEX36Q5VZQ5 186 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 WDR25Q64LD2 544 aaPredicted RBP11.15□□□□□ -0.62
CMTM1-219ENST00000533953 DCDC5Q6ZRR9 648 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 CALHM1Q8IU99 346 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 OR8B3Q8NGG8 313 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 RGP1Q92546 391 aaPredicted RBP11.15□□□□□ -0.62
CMTM1-219ENST00000533953 MRPL48Q96GC5 212 aaKnown RBP11.15□□□□□ -0.62
CMTM1-219ENST00000533953 OR8B2Q96RD0 313 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.62
CMTM1-219ENST00000533953 JAM3Q9BX67 310 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 TMEM160Q9NX00 188 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 OPN4Q9UHM6 478 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 CDC42EP3Q9UKI2 254 aa11.15□□□□□ -0.62
CMTM1-219ENST00000533953 OR5B21A6NL26 309 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 SRRM5B3KS81 715 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 H0YJX3 145 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 ISG15P05161 165 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 CFHR2P36980 270 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 SRP14P37108 136 aaKnown RBP11.14□□□□□ -0.63
CMTM1-219ENST00000533953 SOX2P48431 317 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 STX19Q8N4C7 294 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 FAM216BQ8N7L0 139 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 OR13C3Q8NGS6 347 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 OR5AK2Q8NH90 309 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 TECTBQ96PL2 329 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 SPACA5Q96QH8 159 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 C7orf69Q9H7B7 122 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 PLCXD1Q9NUJ7 323 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 PAK1IP1Q9NWT1 392 aaPredicted RBP11.14□□□□□ -0.63
CMTM1-219ENST00000533953 BABAM2Q9NXR7 383 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 DNAJB11Q9UBS4 358 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 HHLA2Q9UM44 414 aa11.14□□□□□ -0.63
CMTM1-219ENST00000533953 CAB39Q9Y376 341 aaPredicted RBP11.14□□□□□ -0.63
CMTM1-219ENST00000533953 EXOSC1Q9Y3B2 195 aaKnown RBP11.14□□□□□ -0.63
CMTM1-219ENST00000533953 A0A0G2JMP0 313 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 A0A0X1KG70 313 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 PNMA8CA0A1B0GUJ8 204 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 IRGMA1A4Y4 181 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 EFCAB10A6NFE3 127 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 DHRS7CA6NNS2 312 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 C22orf46C9J442 243 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 F8VVB4 439 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 F8VWA3 439 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 DVL1O14640 695 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 TMPRSS2O15393 492 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 FSTL3O95633 263 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 CALCBP10092 127 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 ZNF20P17024 532 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 SRD5A1P18405 259 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 ATF1P18846 271 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 MYL12AP19105 171 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 GLRA1P23415 457 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 CEBPDP49716 269 aaPredicted RBP11.13□□□□□ -0.63
CMTM1-219ENST00000533953 PAX2Q02962 417 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 IKZF1Q13422 519 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 RIPK1Q13546 671 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 MICBQ29980 383 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 TMPRSS11AQ6ZMR5 421 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 NLRC3Q7RTR2 1065 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 ZNF485Q8NCK3 441 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 OR4M2Q8NGB6 313 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 OR13C5Q8NGS8 318 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 OR13C9Q8NGT0 318 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 OR10Z1Q8NGY1 313 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 RFT1Q96AA3 541 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms