RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 C12orf43Q96C57 262 aaKnown RBP12.77□□□□□ -0.37
CPSF1-210ENST00000532935 ANKRD60Q9BZ19 345 aa12.77□□□□□ -0.37
CPSF1-210ENST00000532935 WDR13Q9H1Z4 485 aa12.77□□□□□ -0.37
CPSF1-210ENST00000532935 SMURF1Q9HCE7 757 aa12.77□□□□□ -0.37
CPSF1-210ENST00000532935 GPR173Q9NS66 373 aa12.77□□□□□ -0.37
CPSF1-210ENST00000532935 DNAJB11Q9UBS4 358 aa12.77□□□□□ -0.37
CPSF1-210ENST00000532935 A0A0A6YYJ9 748 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 MAGEA13PA6NCF6 341 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 H3BSH0 61 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 DVL1O14640 695 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 SYT7O43581 403 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 ENSAO43768 121 aaKnown RBP12.76□□□□□ -0.37
CPSF1-210ENST00000532935 FCN3O75636 299 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 RHBDL1O75783 438 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 PPIAL4GP0DN37 164 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 KIR3DL2P43630 455 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 OR12D2P58182 307 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 KLF17Q5JT82 389 aaPredicted RBP12.76□□□□□ -0.37
CPSF1-210ENST00000532935 TTC23Q5W5X9 447 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 CD276Q5ZPR3 534 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 STUMQ69YW2 141 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 ZNF418Q8TF45 676 aaPredicted RBP12.76□□□□□ -0.37
CPSF1-210ENST00000532935 CCL13Q99616 98 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 ADI1Q9BV57 179 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 AMBNQ9NP70 447 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 STAB1Q9NY15 2570 aa12.76□□□□□ -0.37
CPSF1-210ENST00000532935 A0A1B0GW55 424 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 RGS9O75916 674 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-210ENST00000532935 RPSAP08865 295 aaKnown RBP12.75□□□□□ -0.37
CPSF1-210ENST00000532935 UBCP0CG48 685 aaKnown RBP12.75□□□□□ -0.37
CPSF1-210ENST00000532935 DUX4L2P0CJ85 424 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 DUX4L3P0CJ86 424 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 DUX4L4P0CJ87 422 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 DUX4L5P0CJ88 424 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 DUX4L6P0CJ89 424 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 DUX4L7P0CJ90 424 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 CAPGP40121 348 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 ACTA2P62736 377 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 ACTG2P63267 376 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 RAB40BQ12829 278 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 GALEQ14376 348 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 ATPAF1Q5TC12 328 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-210ENST00000532935 FDX2Q6P4F2 183 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 HAGHLQ6PII5 290 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-210ENST00000532935 DUX4L9Q6RFH8 374 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-210ENST00000532935 SLC36A1Q7Z2H8 476 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 LHFPL3Q86UP9 236 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 BPIFB2Q8N4F0 458 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 FAM216BQ8N7L0 139 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 CCDC54Q8NEL0 328 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 OR5T2Q8NGG2 359 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 OR2G2Q8NGZ5 317 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 SPATA3Q8NHX4 192 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 ZNF671Q8TAW3 534 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 APH1BQ8WW43 257 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 C22orf15Q8WYQ4 148 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 ST8SIA4Q92187 359 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 AQP3Q92482 292 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 MRPL48Q96GC5 212 aaKnown RBP12.75□□□□□ -0.37
CPSF1-210ENST00000532935 C4orf36Q96KX1 117 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 SLC6A7Q99884 636 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 PLEKHA1Q9HB21 404 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 BATF3Q9NR55 127 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 SNTG1Q9NSN8 517 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 DUX4Q9UBX2 424 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 NUP50Q9UKX7 468 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 MYRFQ9Y2G1 1151 aa12.75□□□□□ -0.37
CPSF1-210ENST00000532935 RPL36Q9Y3U8 105 aaKnown RBP12.75□□□□□ -0.37
CPSF1-210ENST00000532935 ANK2Q01484 3957 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 LOC107986453A0A1B0GWG9 222 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 PQLC2LA1A4F0 135 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 ANKRD61A6NGH8 418 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 J3QLW9 94 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 VENTXO95231 258 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 FADS2O95864 444 aaKnown RBP12.74□□□□□ -0.37
CPSF1-210ENST00000532935 IGHA1P01876 353 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 HTR1AP08908 422 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 ZNF19P17023 458 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 AMY2BP19961 511 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 MYF6P23409 242 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 GLRA1P23415 457 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 FPR2P25090 351 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 NANOS3P60323 173 aaKnown RBP12.74□□□□□ -0.37
CPSF1-210ENST00000532935 FGF12P61328 243 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 ADARB1P78563 741 aaKnown RBP12.74□□□□□ -0.37
CPSF1-210ENST00000532935 IL18R1Q13478 541 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 C11orf91Q3C1V1 193 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 ZNF691Q5VV52 312 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 USP43Q70EL4 1123 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 BTN2A1Q7KYR7 527 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 ZNF573Q86YE8 665 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 RDH10Q8IZV5 341 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 FGFRL1Q8N441 504 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 ANGPTL6Q8NI99 470 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 UPRTQ96BW1 309 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 PELI1Q96FA3 418 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 MYCBPQ99417 103 aaPredicted RBP12.74□□□□□ -0.37
CPSF1-210ENST00000532935 ALG8Q9BVK2 526 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 C19orf24Q9BVV8 132 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 SUCNR1Q9BXA5 334 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms