RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 SCGB2A2Q13296 93 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 LRRC36Q1X8D7 754 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 MEDAGQ5VYS4 303 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 LPCAT4Q643R3 524 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 Q6ZSR3 168 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 BTN2A1Q7KYR7 527 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 DOK3Q7L591 496 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 OR5A2Q8NGI9 324 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 OR10Z1Q8NGY1 313 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 NPRL2Q8WTW4 380 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 APH1BQ8WW43 257 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 AQP3Q92482 292 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 STMN2Q93045 179 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 DUX5Q96PT3 197 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 PCGF1Q9BSM1 259 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 KAAG1Q9UBP8 84 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 MYRFQ9Y2G1 1151 aa12.84□□□□□ -0.35
CTSB-225ENST00000532409 A0A1B0GVI7 797 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 MDFIC2A0A1B0GVS7 189 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 LOC107986453A0A1B0GWG9 222 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 DAPL1A0PJW8 107 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 SYT7O43581 403 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 CLIC3O95833 236 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 DBTP11182 482 aaKnown RBP12.83□□□□□ -0.36
CTSB-225ENST00000532409 GLRA1P23415 457 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 NANOS3P60323 173 aaKnown RBP12.83□□□□□ -0.36
CTSB-225ENST00000532409 PRB3Q04118 309 aaPredicted RBP12.83□□□□□ -0.36
CTSB-225ENST00000532409 DGUOKQ16854 277 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 CDONQ4KMG0 1287 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 CLVS2Q5SYC1 327 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 BRD3OSQ6XYD6 125 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 FAM220AQ7Z4H9 259 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 ZDHHC22Q8N966 263 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 RHOXF1Q8NHV9 184 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 ANGPTL6Q8NI99 470 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 TRMT10AQ8TBZ6 339 aaKnown RBP12.83□□□□□ -0.36
CTSB-225ENST00000532409 C12orf43Q96C57 262 aaKnown RBP12.83□□□□□ -0.36
CTSB-225ENST00000532409 GAFA1Q96PS6 74 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 TBX15Q96SF7 602 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 SUCNR1Q9BXA5 334 aa12.83□□□□□ -0.36
CTSB-225ENST00000532409 EXOGQ9Y2C4 368 aaKnown RBP12.83□□□□□ -0.36
CTSB-225ENST00000532409 TENM1Q9UKZ4 2725 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 ANK2Q01484 3957 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 IGKV1D-17A0A075B6S4 117 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 A0A0A6YYJ9 748 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 PQLC2LA1A4F0 135 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 ANKRD61A6NGH8 418 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 SLC16A6O15403 523 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 PLATP00750 562 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 MMP9P14780 707 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 FPR2P25090 351 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 PEX2P28328 305 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 HAAOP46952 286 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 TGM4P49221 684 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 ACTC1P68032 377 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 ACTA1P68133 377 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 RCN1Q15293 331 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 SMN1Q16637 294 aaKnown RBP12.82□□□□□ -0.36
CTSB-225ENST00000532409 TUSC1Q2TAM9 212 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 CD276Q5ZPR3 534 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 RUSC1-AS1Q66K80 236 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 ZNF788Q6ZQV5 615 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 USP43Q70EL4 1123 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 SLC36A1Q7Z2H8 476 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 LHFPL3Q86UP9 236 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 ANGPTL5Q86XS5 388 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 ACBD7Q8N6N7 88 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 OR2G2Q8NGZ5 317 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 C1orf147Q96MC9 270 aaPredicted RBP12.82□□□□□ -0.36
CTSB-225ENST00000532409 MS4A7Q9GZW8 240 aaPredicted RBP12.82□□□□□ -0.36
CTSB-225ENST00000532409 ELL3Q9HB65 397 aaPredicted RBP12.82□□□□□ -0.36
CTSB-225ENST00000532409 SMPD3Q9NY59 655 aaPredicted RBP12.82□□□□□ -0.36
CTSB-225ENST00000532409 FRRS1LQ9P0K9 344 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 NLKQ9UBE8 527 aa12.82□□□□□ -0.36
CTSB-225ENST00000532409 RPUSD1Q9UJJ7 312 aaKnown RBP12.82□□□□□ -0.36
CTSB-225ENST00000532409 OR2AT4A6NND4 320 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 ZNF879B4DU55 563 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 J3QLW9 94 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 J3QT63 122 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 WBP4O75554 376 aaKnown RBP12.81□□□□□ -0.36
CTSB-225ENST00000532409 PPIAL4GP0DN37 164 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 PSG2P11465 335 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 ZNF19P17023 458 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 GABRA2P47869 451 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 DLX1P56177 255 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 ARF6P62330 175 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 UBE2V2Q15819 145 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 ATPAF1Q5TC12 328 aaPredicted RBP12.81□□□□□ -0.36
CTSB-225ENST00000532409 CALHM1Q8IU99 346 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 OR10AC1Q8NH08 325 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 TMIGD2Q96BF3 282 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 PELI1Q96FA3 418 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 C4orf36Q96KX1 117 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 WDFY2Q96P53 400 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 ZNF649Q9BS31 505 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 ALG8Q9BVK2 526 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 SIRPDQ9H106 197 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 ISG20L2Q9H9L3 353 aaKnown RBP12.81□□□□□ -0.36
CTSB-225ENST00000532409 PLEKHA1Q9HB21 404 aa12.81□□□□□ -0.36
CTSB-225ENST00000532409 ZNF222Q9UK12 451 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms