RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PCNPQ8WW12 178 aaKnown RBP10.03□□□□□ -0.8
PTPRK-221ENST00000532331 MARC2Q969Z3 335 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 RPEQ96AT9 228 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 PIGMQ9H3S5 423 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 CACFD1Q9UGQ2 172 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 TRAV38-1A0A0B4J264 116 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 TMEM30CPA0ZSE6 113 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 LIPT2A6NK58 231 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 SLC17A2O00624 439 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 AQP7O14520 342 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 SPRY1O43609 319 aaPredicted RBP10.03□□□□□ -0.8
PTPRK-221ENST00000532331 JTBO76095 146 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 C17orf78Q8N4C9 275 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 BSCL2Q96G97 398 aaPredicted RBP10.03□□□□□ -0.8
PTPRK-221ENST00000532331 DOK1Q99704 481 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 TUBGCP6Q96RT7 1819 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 CRYM-AS1A6NIL9 109 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 HOXA6P31267 233 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 TGFBR1P36897 503 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 CCDC71Q8IV32 467 aaPredicted RBP10.03□□□□□ -0.8
PTPRK-221ENST00000532331 MSRB3Q8IXL7 192 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 OR10P1Q8NGE3 313 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 GALMQ96C23 342 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 GNPNAT1Q96EK6 184 aaPredicted RBP10.03□□□□□ -0.8
PTPRK-221ENST00000532331 SIRT3Q9NTG7 399 aaPredicted RBP10.03□□□□□ -0.8
PTPRK-221ENST00000532331 GNG13Q9P2W3 67 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 HS3ST3B1Q9Y662 390 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 NUDT19A8MXV4 375 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 XRCC3O43542 346 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 IGLV3-19P01714 112 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 C1QBP02746 253 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 H2AFB1P0C5Y9 115 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 BTN1A1Q13410 526 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 FBXW9Q5XUX1 488 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 MFSD4AQ8N468 514 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 KCNRGQ8N5I3 272 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 TGIF2Q9GZN2 237 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 SIRT5Q9NXA8 310 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 PATE4P0C8F1 98 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 SPNS3Q6ZMD2 512 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 TERB2Q8NHR7 220 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 ORAI1Q96D31 301 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 CIB3Q96Q77 187 aaPredicted RBP10.03□□□□□ -0.8
PTPRK-221ENST00000532331 TSPAN32Q96QS1 320 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 GINS3Q9BRX5 216 aa10.03□□□□□ -0.8
PTPRK-221ENST00000532331 K7ESF4 209 aa10.02□□□□□ -0.8
PTPRK-221ENST00000532331 ARPC3O15145 178 aa10.02□□□□□ -0.8
PTPRK-221ENST00000532331 PSMB6P28072 239 aa10.02□□□□□ -0.8
PTPRK-221ENST00000532331 CSN1S1P47710 185 aa10.02□□□□□ -0.8
PTPRK-221ENST00000532331 ADIRFQ15847 76 aa10.02□□□□□ -0.8
PTPRK-221ENST00000532331 GPR32P1Q8NGA4 272 aa10.02□□□□□ -0.8
PTPRK-221ENST00000532331 MARCH1Q8TCQ1 289 aa10.02□□□□□ -0.8
PTPRK-221ENST00000532331 ZG16BQ96DA0 208 aa10.02□□□□□ -0.8
PTPRK-221ENST00000532331 PELI1Q96FA3 418 aa10.02□□□□□ -0.8
PTPRK-221ENST00000532331 C20orf141Q9NUB4 165 aa10.02□□□□□ -0.8
PTPRK-221ENST00000532331 ZNF705GA8MUZ8 300 aaPredicted RBP10.02□□□□□ -0.81
PTPRK-221ENST00000532331 FUCA1P04066 466 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 PRF1P14222 555 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 HOXD11P31277 338 aaPredicted RBP10.02□□□□□ -0.81
PTPRK-221ENST00000532331 TLE1Q04724 770 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 PRDX4Q13162 271 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 INO80CQ6PI98 192 aaPredicted RBP10.02□□□□□ -0.81
PTPRK-221ENST00000532331 TMEM182Q6ZP80 229 aaPredicted RBP10.02□□□□□ -0.81
PTPRK-221ENST00000532331 TSEN54Q7Z6J9 526 aaKnown RBP10.02□□□□□ -0.81
PTPRK-221ENST00000532331 OR5D13Q8NGL4 314 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 TPPP3Q9BW30 176 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 SMCO4Q9NRQ5 59 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 TMEFF2Q9UIK5 374 aaPredicted RBP10.02□□□□□ -0.81
PTPRK-221ENST00000532331 AQP7P3A6NL99 342 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 DNPH1O43598 174 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 SSSCA1O60232 199 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 OR4E1P0C645 316 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 FAM87AP0C7U9 286 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 FAAP20Q6NZ36 180 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 ACOT7LQ6ZUV0 252 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 GAL3ST2Q9H3Q3 398 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 C3orf80F5H4A9 247 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 ST8SIA5O15466 376 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 PIGPP57054 158 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 UBE2G2P60604 165 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 SLC25A35Q3KQZ1 300 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 CDONQ4KMG0 1287 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 FAM219BQ5XKK7 198 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 ZNF75AQ96N20 296 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 DERL3Q96Q80 235 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 RHNO1Q9BSD3 238 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 PLEKHA2Q9HB19 425 aa10.02□□□□□ -0.81
PTPRK-221ENST00000532331 STRAPQ9Y3F4 350 aaKnown RBP10.02□□□□□ -0.81
PTPRK-221ENST00000532331 AMMECR1Q9Y4X0 333 aaPredicted RBP10.02□□□□□ -0.81
PTPRK-221ENST00000532331 E5RGE8 158 aa10.01□□□□□ -0.81
PTPRK-221ENST00000532331 PI3P19957 117 aa10.01□□□□□ -0.81
PTPRK-221ENST00000532331 COX7A1P24310 79 aa10.01□□□□□ -0.81
PTPRK-221ENST00000532331 CEACAM3P40198 252 aa10.01□□□□□ -0.81
PTPRK-221ENST00000532331 TAS2R45P59539 299 aa10.01□□□□□ -0.81
PTPRK-221ENST00000532331 UBE2G1P62253 170 aa10.01□□□□□ -0.81
PTPRK-221ENST00000532331 SKP2Q13309 424 aa10.01□□□□□ -0.81
PTPRK-221ENST00000532331 MRGPRGQ86SM5 289 aa10.01□□□□□ -0.81
PTPRK-221ENST00000532331 UBAC2Q8NBM4 344 aa10.01□□□□□ -0.81
PTPRK-221ENST00000532331 PILRAQ9UKJ1 303 aa10.01□□□□□ -0.81
PTPRK-221ENST00000532331 NSG2Q9Y328 171 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms