RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 C10orf105Q8TEF2 133 aa4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 SPTSSAQ969W0 71 aa4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 APOBEC3DQ96AK3 386 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 SLAMF6Q96DU3 332 aa4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 SMR3AQ99954 134 aa4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 COPS4Q9BT78 406 aa4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 OSBPL10Q9BXB5 764 aa4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 PNRC2Q9NPJ4 139 aaKnown RBP4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 CYSLTR2Q9NS75 346 aa4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 DDX28Q9NUL7 540 aaKnown RBP4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 TVP23BQ9NYZ1 205 aa4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 ENOPH1Q9UHY7 261 aa4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 STARD10Q9Y365 291 aa4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 LSM4Q9Y4Z0 139 aaKnown RBP4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 ROS1P08922 2347 aa4.91□□□□□ -1.62
HMGB1P42-201ENST00000532126 H3BNX3 289 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 M0R135 149 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 CTDSPLO15194 276 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 SPRY3O43610 288 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 LY6G6DO95868 133 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 IGHV1-46P01743 117 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 LCATP04180 440 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 ACSM4P0C7M7 580 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 PSKH1P11801 424 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 USF1P22415 310 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 NR4A2P43354 598 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 MAGEB1P43366 347 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 IER3P46695 156 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 NPBWR1P48145 328 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 MMP15P51511 669 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 CCL8P80075 99 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 MRPS11P82912 194 aaKnown RBP4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 SRSF3P84103 164 aaKnown RBP4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 PPP2R2BQ00005 443 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 PSG7Q13046 419 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 EIF2B1Q14232 305 aaKnown RBP4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 GGTLC2Q14390 218 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 RCN1Q15293 331 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 PCK2Q16822 640 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 PNLIPRP3Q17RR3 467 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 RSPO1Q2MKA7 263 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 KRTAP27-1Q3LI81 207 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 SLC35D3Q5M8T2 416 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 AADACL4Q5VUY2 407 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 SLX4IPQ5VYV7 408 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 COLCA1Q6ZS62 124 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 Q71RC1 249 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 SHFQ7M4L6 423 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 MAPK1IP1LQ8NDC0 245 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 BBS1Q8NFJ9 593 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR56B1Q8NGI3 324 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR6N2Q8NGY6 317 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 GTF3AQ92664 365 aaKnown RBP4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 RDH5Q92781 318 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 STMN2Q93045 179 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 HAVCR1Q96D42 359 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 CMBLQ96DG6 245 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZMYND19Q96E35 227 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF799Q96GE5 643 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 PRR25Q96S07 402 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 CIB1Q99828 191 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 RBM4BQ9BQ04 359 aaKnown RBP4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 FAM110AQ9BQ89 295 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 EGLN1Q9GZT9 426 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 S100A14Q9HCY8 104 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 PTTG3PQ9NZH4 202 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 PURGQ9UJV8 347 aaKnown RBP4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 ORC6Q9Y5N6 252 aa4.9□□□□□ -1.63
HMGB1P42-201ENST00000532126 IGHV1-69-2A0A0G2JMI3 117 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZSCAN5BA6NJL1 495 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 VWC2LB2RUY7 222 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 FAM157AC9JC47 383 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF878C9JN71 531 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 LYNX1G3V0Z9 82 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 EI24O14681 340 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 TLX2O43763 284 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 PRKYO43930 277 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 CDC14BO60729 498 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 FCGR3BO75015 233 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 NCR1O76036 304 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 PAHP00439 452 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 APOC1P02654 83 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 MBPP02686 304 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 LYNP07948 512 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 ADH4P08319 380 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 H2BFMP0C1H6 154 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 LYNX1P0DP58 116 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 SELEP16581 610 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 KITLGP21583 273 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 COL8A2P25067 703 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 GIFP27352 417 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 HSD11B1P28845 292 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 EPHA2P29317 976 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 POLR2IP36954 125 aaKnown RBP4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 NAA10P41227 235 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 CRYBB2P43320 205 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 PRKXP51817 358 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 PRRX1P54821 245 aa4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 GRB2P62993 217 aaKnown RBP4.89□□□□□ -1.63
HMGB1P42-201ENST00000532126 LOXL1Q08397 574 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms