RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 A0A1W2PPC1 479 aa10.93□□□□□ -0.66
SCN3B-206ENST00000530277 RPS10-NUDT3A0A1W2PQS6 291 aa10.93□□□□□ -0.66
SCN3B-206ENST00000530277 SIRPB1O00241 398 aa10.93□□□□□ -0.66
SCN3B-206ENST00000530277 RPL12P30050 165 aaKnown RBP10.93□□□□□ -0.66
SCN3B-206ENST00000530277 RPS10P46783 165 aaKnown RBP10.93□□□□□ -0.66
SCN3B-206ENST00000530277 GABRA2P47869 451 aa10.93□□□□□ -0.66
SCN3B-206ENST00000530277 MICBQ29980 383 aa10.93□□□□□ -0.66
SCN3B-206ENST00000530277 FAM122BQ7Z309 247 aa10.93□□□□□ -0.66
SCN3B-206ENST00000530277 NUBPLQ8TB37 319 aa10.93□□□□□ -0.66
SCN3B-206ENST00000530277 NIT2Q9NQR4 276 aa10.93□□□□□ -0.66
SCN3B-206ENST00000530277 P4HTMQ9NXG6 502 aa10.93□□□□□ -0.66
SCN3B-206ENST00000530277 EMC3Q9P0I2 261 aa10.93□□□□□ -0.66
SCN3B-206ENST00000530277 PPP1R3CQ9UQK1 317 aa10.93□□□□□ -0.66
SCN3B-206ENST00000530277 VSIG4Q9Y279 399 aa10.93□□□□□ -0.66
SCN3B-206ENST00000530277 BPNT1O95861 308 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 GABRA1P14867 456 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 MST1P26927 711 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 EFNB1P98172 346 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 PDZK1IP1Q13113 114 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 OR8G2PQ6IF36 304 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 SGK3Q96BR1 496 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 C14orf79Q96F83 325 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 FOXB1Q99853 325 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 EXOSC3Q9NQT5 275 aaKnown RBP10.92□□□□□ -0.66
SCN3B-206ENST00000530277 TMEM200CA6NKL6 621 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 ZNF587BE7ETH6 402 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 SSSCA1O60232 199 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 TSPAN2O60636 221 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 CDC14BO60729 498 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 MRPL49Q13405 166 aaKnown RBP10.92□□□□□ -0.66
SCN3B-206ENST00000530277 TMEM128Q5BJH2 165 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 PDZD11Q5EBL8 140 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 BPIFCQ8NFQ6 507 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 NKX6-2Q9C056 277 aaPredicted RBP10.92□□□□□ -0.66
SCN3B-206ENST00000530277 PURGQ9UJV8 347 aaKnown RBP10.92□□□□□ -0.66
SCN3B-206ENST00000530277 FZR1Q9UM11 496 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 TRIOO75962 3097 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 A0A1W2PQM1 296 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 CD300LBA8K4G0 201 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 MS4A18H0YCH9 400 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 NXPH2O95156 264 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 IL2RGP31785 369 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 BTCP35070 178 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 EXT1Q16394 746 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 MS4A18Q3C1V0 323 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 ALKBH6Q3KRA9 238 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 PAN3Q58A45 887 aaKnown RBP10.92□□□□□ -0.66
SCN3B-206ENST00000530277 ZNF485Q8NCK3 441 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 SFT2D1Q8WV19 159 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 INTS1Q8N201 2190 aaKnown RBP10.92□□□□□ -0.66
SCN3B-206ENST00000530277 OR2F2O95006 317 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 LIMK1P53667 647 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 RAB5BP61020 215 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 PCBD1P61457 104 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 OR2F1Q13607 317 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 TESK1Q15569 626 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 ZFP62Q8NB50 900 aaPredicted RBP10.92□□□□□ -0.66
SCN3B-206ENST00000530277 OR10D3Q8NH80 312 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 APH1AQ96BI3 265 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 DNAJB11Q9UBS4 358 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 ZNF629Q9UEG4 869 aaPredicted RBP10.92□□□□□ -0.66
SCN3B-206ENST00000530277 HDGFL3Q9Y3E1 203 aa10.92□□□□□ -0.66
SCN3B-206ENST00000530277 IGLV1-36A0A0B4J1U3 117 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 ZFP92A6NM28 416 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 C1orf196B1AJZ1 125 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 ZNF814B7Z6K7 855 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 HMGB3O15347 200 aaKnown RBP10.91□□□□□ -0.66
SCN3B-206ENST00000530277 GSTZ1O43708 216 aaPredicted RBP10.91□□□□□ -0.66
SCN3B-206ENST00000530277 LYPD3O95274 346 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 ELLP55199 621 aaPredicted RBP10.91□□□□□ -0.66
SCN3B-206ENST00000530277 PIGYQ3MUY2 71 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 RPL7L1Q6DKI1 246 aaKnown RBP10.91□□□□□ -0.66
SCN3B-206ENST00000530277 TMEM123Q8N131 208 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 OR9K2Q8NGE7 335 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 OR5M9Q8NGP3 310 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 CNTNAP3Q9BZ76 1288 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 DENND4CQ5VZ89 1909 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 DAOP14920 347 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 FABP6P51161 128 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 STPG1Q5TH74 334 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 CBLN2Q8IUK8 224 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 ZNF709Q8N972 641 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 OR56B2PQ8NGI1 322 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 GPX8Q8TED1 209 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 EMG1Q92979 244 aaKnown RBP10.91□□□□□ -0.66
SCN3B-206ENST00000530277 BCO1Q9HAY6 547 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 NECAP2Q9NVZ3 263 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 SPG11Q96JI7 2443 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 PRR14LQ5THK1 2151 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 CCDC187A0A096LP49 1063 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 EIF3GO75821 320 aaKnown RBP eCLIP10.91□□□□□ -0.66
SCN3B-206ENST00000530277 CBR3O75828 277 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 IAPPP10997 89 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 CNR1P21554 472 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 ACER2Q5QJU3 275 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 TMEM65Q6PI78 240 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 C6orf15Q6UXA7 325 aaPredicted RBP10.91□□□□□ -0.66
SCN3B-206ENST00000530277 CLEC18BQ6UXF7 455 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 ADAM19Q9H013 955 aa10.91□□□□□ -0.66
SCN3B-206ENST00000530277 WDR13Q9H1Z4 485 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms