RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 CD2P06729 351 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 PGA4P0DJD7 388 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 PGA3P0DJD8 388 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 KLK2P20151 261 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 RAB6AP20340 208 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 SNTB1Q13884 538 aaKnown RBP12.73□□□□□ -0.37
NR1H3-231ENST00000529540 MEP1BQ16820 701 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 PAN3Q58A45 887 aaKnown RBP12.73□□□□□ -0.37
NR1H3-231ENST00000529540 FAM74A1Q5RGS3 127 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 C1orf100Q5SVJ3 147 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 FAM214BQ7L5A3 538 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 ABHD12BQ7Z5M8 362 aaPredicted RBP12.73□□□□□ -0.37
NR1H3-231ENST00000529540 TMED4Q7Z7H5 227 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 LYG2Q86SG7 212 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 DOLPP1Q86YN1 238 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 TUSC5Q8IXB3 177 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 BPIFB2Q8N4F0 458 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 ZIC4Q8N9L1 334 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 ZNF385AQ96PM9 386 aaKnown RBP12.73□□□□□ -0.37
NR1H3-231ENST00000529540 PRRT1Q99946 306 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 MRPL13Q9BYD1 178 aaKnown RBP12.73□□□□□ -0.37
NR1H3-231ENST00000529540 SYT4Q9H2B2 425 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 B9D1Q9UPM9 204 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 BOD1L1Q8NFC6 3051 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 LOC390937A0A1W2PQ73 354 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 NUDT19A8MXV4 375 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 E9PLN8 166 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 FGF16O43320 207 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 ATG12O94817 140 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 CNOT4O95628 575 aaKnown RBP12.73□□□□□ -0.37
NR1H3-231ENST00000529540 PLATP00750 562 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 CSNK1A1P48729 337 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 PMPCAQ10713 525 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 STK11Q15831 433 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 RIPPLY2Q5TAB7 128 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 SHEQ5VZ18 495 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 FAHD2BQ6P2I3 314 aaPredicted RBP12.73□□□□□ -0.37
NR1H3-231ENST00000529540 TMEM185AQ8NFB2 350 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 STOML3Q8TAV4 291 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 ASB5Q8WWX0 329 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 APH1AQ96BI3 265 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 FAHD2AQ96GK7 314 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 VKORC1Q9BQB6 163 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 EMC6Q9BV81 110 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 LINC00470Q9BZP3 86 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 TAS2R4Q9NYW5 299 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 SLC22A13Q9Y226 551 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 NOP16Q9Y3C1 178 aaKnown RBP12.73□□□□□ -0.37
NR1H3-231ENST00000529540 FAM215AQ9Y5M1 114 aa12.73□□□□□ -0.37
NR1H3-231ENST00000529540 ITPR1Q14643 2758 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 RPS27P42677 84 aaKnown RBP12.72□□□□□ -0.37
NR1H3-231ENST00000529540 GUSBP1Q15486 140 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 HIST3H3Q16695 136 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 ODF4Q2M2E3 257 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 ELP2Q6IA86 826 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 RTL6Q6ICC9 239 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 KCTD18Q6PI47 426 aaPredicted RBP12.72□□□□□ -0.37
NR1H3-231ENST00000529540 ZNF627Q7L945 461 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 ZNF100Q8IYN0 542 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 TMEM123Q8N131 208 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 GPR137CQ8N3F9 429 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 MITD1Q8WV92 249 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 AQP3Q92482 292 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 ZNF75AQ96N20 296 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 SLC6A7Q99884 636 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 SFXN3Q9BWM7 321 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 ZNF471Q9BX82 626 aaPredicted RBP12.72□□□□□ -0.37
NR1H3-231ENST00000529540 VSIG4Q9Y279 399 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 SPTA1P02549 2419 aa12.72□□□□□ -0.37
NR1H3-231ENST00000529540 BSNQ9UPA5 3926 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 IGLV1-36A0A0B4J1U3 117 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 TMEM218A2RU14 115 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 F8VVB4 439 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 F8VWA3 439 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 SRSF10O75494 262 aaKnown RBP12.71□□□□□ -0.37
NR1H3-231ENST00000529540 GPANK1O95872 356 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 PNPP00491 289 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 GUCA1AP43080 201 aaPredicted RBP12.71□□□□□ -0.37
NR1H3-231ENST00000529540 CA7P43166 264 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 RIDAP52758 137 aaKnown RBP12.71□□□□□ -0.37
NR1H3-231ENST00000529540 GLO1Q04760 184 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 MFGE8Q08431 387 aaPredicted RBP12.71□□□□□ -0.37
NR1H3-231ENST00000529540 C10orf91Q5T1B1 145 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 ZNF813Q6ZN06 617 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 LYPD6Q86Y78 171 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 ZNF584Q8IVC4 421 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 C20orf196Q8IYI0 205 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 C9orf106Q8NAJ2 232 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 PLPP7Q8NBV4 271 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 TMEM54Q969K7 222 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 PDCD10Q9BUL8 212 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 FOXD3Q9UJU5 478 aaPredicted RBP12.71□□□□□ -0.37
NR1H3-231ENST00000529540 RHBDD3Q9Y3P4 386 aa12.71□□□□□ -0.37
NR1H3-231ENST00000529540 CACNA1BQ00975 2339 aa12.71□□□□□ -0.38
NR1H3-231ENST00000529540 TRGV8A0A0C4DH27 118 aa12.7□□□□□ -0.38
NR1H3-231ENST00000529540 IL18BPO95998 194 aa12.7□□□□□ -0.38
NR1H3-231ENST00000529540 HLA-AP01891 365 aaKnown RBP12.7□□□□□ -0.38
NR1H3-231ENST00000529540 CEACAM8P31997 349 aaPredicted RBP12.7□□□□□ -0.38
NR1H3-231ENST00000529540 OPRM1P35372 400 aa12.7□□□□□ -0.38
NR1H3-231ENST00000529540 HOXA1P49639 335 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms