RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 KPTNQ9Y664 436 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 R4GMQ9 66 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 V9GYS6 101 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 PKD1L1Q8TDX9 2849 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 A0A1W2PQL4 384 aaPredicted RBP8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 FAM181BA6NEQ2 426 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 SAC3D1A6NKF1 404 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 SLC22A31A6NKX4 558 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 OR2AT4A6NND4 320 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 ZNF670-ZNF695F2Z2N8 137 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 LOC110117498-PIK3R3F6TDL0 507 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 RNASEK-C17orf49H0YIS7 233 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 SIGLEC5O15389 551 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 SYNGR1O43759 233 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 DHRS3O75911 302 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 NRASP01111 189 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 PSG2P11465 335 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 ATP6V1B1P15313 513 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 GLRA1P23415 457 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 RASSF2P50749 326 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 LRRC10Q5BKY1 277 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 ZBTB37Q5TC79 503 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 PLCXD3Q63HM9 321 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 HAGHLQ6PII5 290 aaPredicted RBP8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 FIP1L1Q6UN15 594 aaKnown RBP8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 Q6ZSR3 168 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 THAP5Q7Z6K1 395 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 COMMD2Q86X83 199 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 PNKDQ8N490 385 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 ZNRF1Q8ND25 227 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 TMIGD2Q96BF3 282 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 CENPNQ96H22 339 aaPredicted RBP8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 MNTQ99583 582 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 TBX5Q99593 518 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 OSBPL10Q9BXB5 764 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 GABARAPL3Q9BY60 117 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 PRRG3Q9BZD7 231 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 DNTTIP1Q9H147 329 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 RIBC2Q9H4K1 309 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 SIRT7Q9NRC8 400 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 GPR173Q9NS66 373 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 ACOXLQ9NUZ1 547 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 ONECUT1Q9UBC0 465 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 ENPP5Q9UJA9 477 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 OR52A1Q9UKL2 312 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 GTF2A1LQ9UNN4 478 aa8.57□□□□□ -1.04
PRPF40B-204ENST00000527253 A0A1W2PRD5 423 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 A0A1W2PRF3 423 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 A0A1W2PRM7 423 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 PQLC2LA1A4F0 135 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 OR5B21A6NL26 309 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 E9PQ18 207 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 H3BNX3 289 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 GPR37O15354 613 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 MTRF1O75570 445 aaKnown RBP8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 RPP14O95059 124 aaKnown RBP8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 IGHV4-59P01825 116 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 FCGR1AP12314 374 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 CCL1P22362 96 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 HTR1FP30939 366 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 IER3P46695 156 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 GABRA2P47869 451 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 IL13RA1P78552 427 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 EGR3Q06889 387 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 SRSF4Q08170 494 aaKnown RBP8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 KLRD1Q13241 179 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 BCL2L15Q5TBC7 163 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 HCP5Q6MZN7 132 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 SHISA2Q6UWI4 295 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 ACP7Q6ZNF0 438 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 CATSPERDQ86XM0 798 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 BATF2Q8N1L9 274 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 TMEM86BQ8N661 226 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 CD177Q8N6Q3 437 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 KIR3DL3Q8N743 410 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 POC1AQ8NBT0 407 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 SGMS2Q8NHU3 365 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 ZNF671Q8TAW3 534 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 PYDC1Q8WXC3 89 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 H1FXQ92522 213 aaKnown RBP8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 ITFG2Q969R8 447 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 EME1Q96AY2 570 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 SDSLQ96GA7 329 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 MED30Q96HR3 178 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 DMRTB1Q96MA1 342 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 C1RLQ9NZP8 487 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 SLC25A10Q9UBX3 287 aaPredicted RBP8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 WARS2Q9UGM6 360 aaKnown RBP8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 SNX5Q9Y5X3 404 aa8.56□□□□□ -1.04
PRPF40B-204ENST00000527253 A0A1B0GVI7 797 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 NKX6-3A6NJ46 265 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 METTL15A6NJ78 407 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 H3BSH0 61 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 SPRY1O43609 319 aaPredicted RBP8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 NOS1APO75052 506 aaPredicted RBP8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 OR2T7P0C7T2 308 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 PGA5P0DJD9 388 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 NDUFB7P17568 137 aa8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 CEBPDP49716 269 aaPredicted RBP8.55□□□□□ -1.04
PRPF40B-204ENST00000527253 CAV3P56539 151 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms