RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 FAM71F1Q96KD3 344 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-204ENST00000526430 OPA3Q9H6K4 179 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 ZNF665Q9H7R5 613 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 ACOT13Q9NPJ3 140 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 DCAF16Q9NXF7 216 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 MRPL15Q9P015 296 aaKnown RBP9.13□□□□□ -0.95
NEDD8-204ENST00000526430 ZNF391Q9UJN7 358 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 SF3B6Q9Y3B4 125 aaKnown RBP9.13□□□□□ -0.95
NEDD8-204ENST00000526430 CACNG2Q9Y698 323 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 BIRC6Q9NR09 4857 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 TANC2Q9HCD6 1990 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 LOC107986453A0A1B0GWG9 222 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 GGT3PA6NGU5 568 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 TRIM64CA6NLI5 447 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 F5H5P2 479 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 MRPS14O60783 128 aaKnown RBP9.12□□□□□ -0.95
NEDD8-204ENST00000526430 RP2O75695 350 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 CD1AP06126 327 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 ATP6V1B1P15313 513 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 FAHP16930 419 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 LIPAP38571 399 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 MRPL28Q13084 256 aaKnown RBP9.12□□□□□ -0.95
NEDD8-204ENST00000526430 SPHARQ15513 63 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 MOGQ16653 247 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 TSTQ16762 297 aaKnown RBP9.12□□□□□ -0.95
NEDD8-204ENST00000526430 NKPD1Q17RQ9 610 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 FAM76BQ5HYJ3 339 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 BRICD5Q6PL45 260 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 RNF144BQ7Z419 303 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 FAM220AQ7Z4H9 259 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 OR10AD1Q8NGE0 317 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 OR13G1Q8NGZ3 307 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 HPSE2Q8WWQ2 592 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 ITFG2Q969R8 447 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 RAB39BQ96DA2 213 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 ITPKCQ96DU7 683 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 OPALINQ96PE5 141 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 CYSLTR2Q9NS75 346 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 ZNF275Q9NSD4 429 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-204ENST00000526430 TMEM100Q9NV29 134 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 GPR160Q9UJ42 338 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 ZDHHC8Q9ULC8 765 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 GTF2A1LQ9UNN4 478 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 ERGIC3Q9Y282 383 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 LRCH1Q9Y2L9 728 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 DOCK11Q5JSL3 2073 aa9.12□□□□□ -0.95
NEDD8-204ENST00000526430 TET2Q6N021 2002 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-204ENST00000526430 IGKV1-9A0A0C4DH69 117 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 TRBV2A0A0J9YWF9 115 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 TRBV5-5A0A0J9YX44 114 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 ZNF850A8MQ14 1090 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 SYT7O43581 403 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 GMDSO60547 372 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 CFL1P23528 166 aaKnown RBP9.11□□□□□ -0.95
NEDD8-204ENST00000526430 CD200P41217 278 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 MAP2K3P46734 347 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 GP2P55259 537 aaKnown RBP9.11□□□□□ -0.95
NEDD8-204ENST00000526430 SELENOVP59797 346 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 HOXA4Q00056 320 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-204ENST00000526430 BDH1Q02338 343 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 RIPPLY1Q0D2K3 151 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 TPBGQ13641 420 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 INSL4Q14641 139 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 SLC9A3R2Q15599 337 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 MPPED2Q15777 294 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 TBCEQ15813 527 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-204ENST00000526430 UBE2V2Q15819 145 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 KCTD21Q4G0X4 260 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 TMEM244Q5VVB8 128 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 ZNF529Q6P280 563 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 UNQ9370/PRO34162Q6UXP9 181 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 CSNK2A3Q8NEV1 391 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 OR2Z1Q8NG97 314 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 OR13C5Q8NGS8 318 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 ITLN1Q8WWA0 313 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 OR5P3Q8WZ94 311 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 GHSRQ92847 366 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 ORAI1Q96D31 301 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 SMIM19Q96E16 107 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 MRPL48Q96GC5 212 aaKnown RBP9.11□□□□□ -0.95
NEDD8-204ENST00000526430 MND1Q9BWT6 205 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 PPIL3Q9H2H8 161 aaKnown RBP9.11□□□□□ -0.95
NEDD8-204ENST00000526430 C7orf69Q9H7B7 122 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 BEX1Q9HBH7 125 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 CGGBP1Q9UFW8 167 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-204ENST00000526430 PIGLQ9Y2B2 252 aa9.11□□□□□ -0.95
NEDD8-204ENST00000526430 IGKV1-27A0A075B6S5 117 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 IGHV3-64DA0A0J9YX35 117 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 ANKRD61A6NGH8 418 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 TMEM212A6NML5 194 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 DHRS7CA6NNS2 312 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 PPIHO43447 177 aaKnown RBP9.1□□□□□ -0.95
NEDD8-204ENST00000526430 SC5DO75845 299 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 INMTO95050 263 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 UBCP0CG48 685 aaKnown RBP9.1□□□□□ -0.95
NEDD8-204ENST00000526430 CELP19835 753 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 CRYBB2P43320 205 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 GATA4P43694 442 aa9.1□□□□□ -0.95
NEDD8-204ENST00000526430 TNFAIP6P98066 277 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-204ENST00000526430 PRDX4Q13162 271 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms