RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 TMPRSS13Q9BYE2 586 aa8.51□□□□□ -1.05
VPS28-204ENST00000526054 UFSP2Q9NUQ7 469 aa8.51□□□□□ -1.05
VPS28-204ENST00000526054 CLEC2DQ9UHP7 191 aa8.51□□□□□ -1.05
VPS28-204ENST00000526054 HHLA2Q9UM44 414 aa8.51□□□□□ -1.05
VPS28-204ENST00000526054 hCG_1807616A0A1W2PRN6 198 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 ISPDA4D126 451 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 ANKRD61A6NGH8 418 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 OR5B21A6NL26 309 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 E9PI62 339 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 H3BSH0 61 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 J3QLI3 93 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 SPRY1O43609 319 aaPredicted RBP8.5□□□□□ -1.05
VPS28-204ENST00000526054 RGS10O43665 173 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 SERPINA3P01011 423 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 NRASP01111 189 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 AVPP01185 164 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 GRPP07492 148 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 ZNF20P17024 532 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 ADRA2CP18825 462 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 CRHBPP24387 322 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 EEF1B2P24534 225 aaKnown RBP8.5□□□□□ -1.05
VPS28-204ENST00000526054 COMPP49747 757 aaPredicted RBP8.5□□□□□ -1.05
VPS28-204ENST00000526054 WNT4P56705 351 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 GNG3P63215 75 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 SLC35A2P78381 396 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 CEACAM21Q3KPI0 293 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 CEP78Q5JTW2 689 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 RNLSQ5VYX0 342 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 MOB3CQ70IA8 216 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 RDH10Q8IZV5 341 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 BPIFB2Q8N4F0 458 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 OR1M1Q8NGA1 313 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 OR13C3Q8NGS6 347 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 GATAD2BQ8WXI9 593 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 OR5P3Q8WZ94 311 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 RNF170Q96K19 258 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 SLC6A7Q99884 636 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 MND1Q9BWT6 205 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 DUSP21Q9H596 190 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 C1orf123Q9NWV4 160 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 BABAM2Q9NXR7 383 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 SCOCQ9UIL1 159 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 NPTNQ9Y639 398 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 WNK2Q9Y3S1 2297 aa8.5□□□□□ -1.05
VPS28-204ENST00000526054 TMEM89A2RUT3 159 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 TMEM178BH3BS89 294 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 ZFPL1O95159 310 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 CYB5R3P00387 301 aaPredicted RBP8.49□□□□□ -1.05
VPS28-204ENST00000526054 GATA3P23771 443 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 GTF2A1P52655 376 aaPredicted RBP8.49□□□□□ -1.05
VPS28-204ENST00000526054 BTG1P62324 171 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 ZNF154Q13106 437 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 CNN3Q15417 329 aaKnown RBP8.49□□□□□ -1.05
VPS28-204ENST00000526054 MPPED2Q15777 294 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 TMEM42Q69YG0 159 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 MUC20Q8N307 709 aaPredicted RBP8.49□□□□□ -1.05
VPS28-204ENST00000526054 SPICQ8N5J4 248 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 NANOGP1Q8N7R0 232 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 TSPAN14Q8NG11 270 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 OR5A2Q8NGI9 324 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 NANPQ8TBE9 248 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 RPS4Y2Q8TD47 263 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 TSEN15Q8WW01 171 aaKnown RBP8.49□□□□□ -1.05
VPS28-204ENST00000526054 HPSE2Q8WWQ2 592 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 PP6455Q8WZ26 134 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 SMIM19Q96E16 107 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 CDCA4Q9BXL8 241 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 CHST5Q9GZS9 411 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 CCDC90BQ9GZT6 254 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 PPP1R3EQ9H7J1 279 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 GPR173Q9NS66 373 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 DCAF16Q9NXF7 216 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 ERVK-18Q9QC07 812 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 RNF7Q9UBF6 113 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 SLC7A11Q9UPY5 501 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 DHDHQ9UQ10 334 aa8.49□□□□□ -1.05
VPS28-204ENST00000526054 PPIAL4EA0A075B759 164 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 A0A087WXM4 84 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 A6NIN4 97 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 ZNF732B4DXR9 585 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 PPIAL4DF5H284 164 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 OGG1O15527 345 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 MRPS14O60783 128 aaKnown RBP8.48□□□□□ -1.05
VPS28-204ENST00000526054 IGHV2-70P01814 119 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 CD2P06729 351 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 OCM2P0CE71 109 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 OCMP0CE72 109 aaPredicted RBP8.48□□□□□ -1.05
VPS28-204ENST00000526054 PPIAL4FP0DN26 164 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 MDH2P40926 338 aaKnown RBP8.48□□□□□ -1.05
VPS28-204ENST00000526054 PMELP40967 661 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 GPM6AP51674 278 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 LCN2P80188 198 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 BDH1Q02338 343 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 TMEM155Q4W5P6 130 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 XAF1Q6GPH4 301 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 ZNF773Q6PK81 442 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 PRSS48Q7RTY5 328 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 WDR86Q86TI4 376 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 ZNF485Q8NCK3 441 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 OR10AC1Q8NH08 325 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms