RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CADP27708 2225 aa3.86□□□□□ -1.79
CHMP4A-202ENST00000524955 OTOGQ6ZRI0 2925 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 ABCA12Q86UK0 2595 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 PRRC2AP48634 2157 aaKnown RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 ABCA4P78363 2273 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 IGKV1-12A0A0C4DH73 117 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 TRBV5-5A0A0J9YX44 114 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 CEACAM18A8MTB9 384 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF879B4DU55 563 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 NDUFS8O00217 210 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 ADAM20O43506 726 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 PLPP2O43688 288 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 FCN3O75636 299 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 CDRT1O95170 752 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 PTBP3O95758 552 aaKnown RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 IGKV1D-12P01611 117 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 IGHV2-5P01817 119 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 CSF3P09919 207 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 SLC25A16P16260 332 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 AMY2BP19961 511 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 BCL3P20749 454 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 PCMT1P22061 227 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 ZFP36P26651 326 aaKnown RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 TGFBR2P37173 567 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 GATA4P43694 442 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 GABRA2P47869 451 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 OR3A4PP47883 348 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 NPBWR2P48146 333 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 CHN2P52757 468 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 GP2P55259 537 aaKnown RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 MTCP1P56278 107 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 TMEM33P57088 247 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 DSCR9P59020 149 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 TAS2R43P59537 309 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 LMO4P61968 165 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 BTG1P62324 171 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 FABP5Q01469 135 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 PRB3Q04118 309 aaPredicted RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 IKZF1Q13422 519 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 TMEM249Q2WGJ8 235 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 CCDC58Q4VC31 144 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 ARMCX4Q5H9R4 360 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF773Q6PK81 442 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 CRIP3Q6Q6R5 217 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 TMEM91Q6ZNR0 172 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 Q6ZSR3 168 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 SLC25A26Q70HW3 274 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 C1QL2Q7Z5L3 287 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 CEACAM19Q7Z692 300 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 PEG10Q86TG7 708 aaKnown RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 LRRC28Q86X40 367 aaPredicted RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 FAM90A1Q86YD7 464 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 LURAP1LQ8IV03 231 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 SERPINA12Q8IW75 414 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 PHC2Q8IXK0 858 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 FTMTQ8N4E7 242 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 FAM216BQ8N7L0 139 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 SPERTQ8NA61 448 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 OR52N4Q8NGI2 321 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 OR5A2Q8NGI9 324 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 OR11L1Q8NGX0 322 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 RPS4Y2Q8TD47 263 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 GPR148Q8TDV2 347 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 MSI2Q96DH6 328 aaKnown RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 TIMD4Q96H15 378 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 DERL3Q96Q80 235 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 NR1H4Q96RI1 486 aaPredicted RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 MGLLQ99685 303 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 CHST5Q9GZS9 411 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 FAM192AQ9GZU8 254 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 SLC22A4Q9H015 551 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 KCNK15Q9H427 330 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 ZCCHC4Q9H5U6 513 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 RNF167Q9H6Y7 350 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 TMEM165Q9HC07 324 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 SMURF1Q9HCE7 757 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 MYOZ1Q9NP98 299 aaPredicted RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 RBFOX1Q9NWB1 397 aaKnown RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 ING3Q9NXR8 418 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 MTCH1Q9NZJ7 389 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF581Q9P0T4 197 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 CTSZQ9UBR2 303 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 DNAJB11Q9UBS4 358 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 OR14J1Q9UGF5 321 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 METRNQ9UJH8 293 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 FBXO9Q9UK97 447 aaPredicted RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 BLOC1S6Q9UL45 172 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 PCDHB10Q9UN67 800 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 NOP16Q9Y3C1 178 aaKnown RBP3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 LRRC42Q9Y546 428 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 DSCAMO60469 2012 aa3.85□□□□□ -1.79
CHMP4A-202ENST00000524955 ITPR2Q14571 2701 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 IGKV1D-17A0A075B6S4 117 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 IGHV3OR16-10A0A075B7F0 116 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 NBPF19A0A087WUL8 3843 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 TRBV5-7A0A0A0MS05 114 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 A0A1W2PP11 408 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 OOEPA6NGQ2 149 aa3.84□□□□□ -1.79
CHMP4A-202ENST00000524955 OR5B21A6NL26 309 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms