RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 C9orf106Q8NAJ2 232 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 TECTBQ96PL2 329 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 PLSCR2Q9NRY7 297 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 GPR160Q9UJ42 338 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 MEIKINA0A087WXM9 373 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 SNRPGP15A8MWD9 76 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 LYZL6O75951 148 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 PMP2P02689 132 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 PDGFAP04085 211 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 IFNA6P05013 189 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 IFITM2Q01629 132 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 C4orf46Q504U0 113 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 ZBTB37Q5TC79 503 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 OR4K15Q8NH41 348 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 PRRT1Q99946 306 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 PECRQ9BY49 303 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 POFUT1Q9H488 388 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 EIF3KQ9UBQ5 218 aaKnown RBP13.2□□□□□ -0.3
BEST1-204ENST00000524926 SVILO95425 2214 aa13.2□□□□□ -0.3
BEST1-204ENST00000524926 SPTBN2O15020 2390 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 TMEM82A0PJX8 343 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 UBE2QL1A1L167 161 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 SERPINA5P05154 406 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 UBE2NP61088 152 aaKnown RBP13.19□□□□□ -0.3
BEST1-204ENST00000524926 PDZK1IP1Q13113 114 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 CDK10Q15131 360 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 SF3B4Q15427 424 aaKnown RBP eCLIP13.19□□□□□ -0.3
BEST1-204ENST00000524926 NKAPLQ5M9Q1 402 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 LIX1LQ8IVB5 337 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 UXS1Q8NBZ7 420 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 SLC30A7Q8NEW0 376 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 WNT2BQ93097 391 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 HYLS1Q96M11 299 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 ST6GALNAC5Q9BVH7 336 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 ZNF436Q9C0F3 470 aaPredicted RBP13.19□□□□□ -0.3
BEST1-204ENST00000524926 PLEKHJ1Q9NW61 149 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 MGAT4CQ9UBM8 478 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 DCHS1Q96JQ0 3298 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 OR14I1A6ND48 311 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 FOXI3A8MTJ6 420 aaPredicted RBP13.19□□□□□ -0.3
BEST1-204ENST00000524926 AHRRA9YTQ3 701 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 ZNF780AO75290 641 aaPredicted RBP13.19□□□□□ -0.3
BEST1-204ENST00000524926 TAF9Q16594 264 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 C6orf201Q7Z4U5 140 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 OR13C8Q8NGS7 320 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 SNAPC3Q92966 411 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 FBXW5Q969U6 566 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 Q96M66 194 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 TMEM246Q9BRR3 403 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 CHIAQ9BZP6 476 aa13.19□□□□□ -0.3
BEST1-204ENST00000524926 MGAQ8IWI9 3026 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 K7EM74 188 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 WNT5AP41221 380 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 KIR2DL2P43627 348 aaPredicted RBP13.18□□□□□ -0.3
BEST1-204ENST00000524926 PRDX4Q13162 271 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 ACSF3Q4G176 576 aaPredicted RBP13.18□□□□□ -0.3
BEST1-204ENST00000524926 VWA1Q6PCB0 445 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 Q6ZS92 163 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 Q6ZT83 130 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 BHLHE23Q8NDY6 225 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 OR51F2Q8NH61 342 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 OCSTAMPQ9BR26 566 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 RANBP3Q9H6Z4 567 aaPredicted RBP13.18□□□□□ -0.3
BEST1-204ENST00000524926 LUZP4Q9P127 313 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 IGKV1-12A0A0C4DH73 117 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 IGKV1D-12P01611 117 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 CBX5P45973 191 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 ARL6IP1Q15041 203 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 GUSBP1Q15486 140 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 TSC22D1Q15714 1073 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 CALHM1Q8IU99 346 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 MUC20Q8N307 709 aaPredicted RBP13.18□□□□□ -0.3
BEST1-204ENST00000524926 FTMTQ8N4E7 242 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 CCDC107Q8WV48 283 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 WBP1Q96G27 269 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 DLL4Q9NR61 685 aa13.18□□□□□ -0.3
BEST1-204ENST00000524926 ZNF629Q9UEG4 869 aaPredicted RBP13.18□□□□□ -0.3
BEST1-204ENST00000524926 SERPINE3A8MV23 424 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 TBPP20226 339 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 IL32P24001 234 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 PER3P56645 1201 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 UBE2MP61081 183 aaKnown RBP13.17□□□□□ -0.3
BEST1-204ENST00000524926 FOXF2Q12947 444 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 MICBQ29980 383 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 TBC1D28Q2M2D7 210 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 ATPAF1Q5TC12 328 aaPredicted RBP13.17□□□□□ -0.3
BEST1-204ENST00000524926 ASCL4Q6XD76 172 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 CSNK2A3Q8NEV1 391 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 ZFAND1Q8TCF1 268 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 ST8SIA4Q92187 359 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 TRAF4Q9BUZ4 470 aaPredicted RBP13.17□□□□□ -0.3
BEST1-204ENST00000524926 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.17□□□□□ -0.3
BEST1-204ENST00000524926 SLC2A8Q9NY64 477 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 CRIM1Q9NZV1 1036 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 ZNF230Q9UIE0 474 aaPredicted RBP13.17□□□□□ -0.3
BEST1-204ENST00000524926 FAM172BPA6NC97 362 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 SFTPBP07988 381 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 OR4E1P0C645 316 aa13.17□□□□□ -0.3
BEST1-204ENST00000524926 IDH3GP51553 393 aaPredicted RBP13.17□□□□□ -0.3
BEST1-204ENST00000524926 OR2A2Q6IF42 318 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms