RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 MRPL2Q5T653 305 aaKnown RBP1.05□□□□□ -2.24
PCM1-217ENST00000522998 APOBEC3HQ6NTF7 200 aaKnown RBP1.05□□□□□ -2.24
PCM1-217ENST00000522998 ADM2Q7Z4H4 148 aa1.05□□□□□ -2.24
PCM1-217ENST00000522998 TMCO2Q7Z6W1 182 aaPredicted RBP1.05□□□□□ -2.24
PCM1-217ENST00000522998 CNPY4Q8N129 248 aa1.05□□□□□ -2.24
PCM1-217ENST00000522998 TRAM1L1Q8N609 369 aa1.05□□□□□ -2.24
PCM1-217ENST00000522998 BBOF1Q8ND07 529 aa1.05□□□□□ -2.24
PCM1-217ENST00000522998 ZCCHC13Q8WW36 166 aaKnown RBP1.05□□□□□ -2.24
PCM1-217ENST00000522998 HGDQ93099 445 aa1.05□□□□□ -2.24
PCM1-217ENST00000522998 ISG20Q96AZ6 181 aaKnown RBP1.05□□□□□ -2.24
PCM1-217ENST00000522998 NAPGQ99747 312 aaPredicted RBP1.05□□□□□ -2.24
PCM1-217ENST00000522998 IL22Q9GZX6 179 aa1.05□□□□□ -2.24
PCM1-217ENST00000522998 NAA50Q9GZZ1 169 aaKnown RBP1.05□□□□□ -2.24
PCM1-217ENST00000522998 STMN4Q9H169 189 aaPredicted RBP1.05□□□□□ -2.24
PCM1-217ENST00000522998 ARV1Q9H2C2 271 aa1.05□□□□□ -2.24
PCM1-217ENST00000522998 TRIM45Q9H8W5 580 aaPredicted RBP1.05□□□□□ -2.24
PCM1-217ENST00000522998 TAS2R1Q9NYW7 299 aa1.05□□□□□ -2.24
PCM1-217ENST00000522998 RWDD2AQ9UIY3 292 aa1.05□□□□□ -2.24
PCM1-217ENST00000522998 NDRG2Q9UN36 371 aaKnown RBP1.05□□□□□ -2.24
PCM1-217ENST00000522998 RHBDD3Q9Y3P4 386 aa1.05□□□□□ -2.24
PCM1-217ENST00000522998 WDR19Q8NEZ3 1342 aa1.05□□□□□ -2.24
PCM1-217ENST00000522998 LOC102724200A0A096LPH7 203 aaPredicted RBP1.04□□□□□ -2.24
PCM1-217ENST00000522998 ARPC4-TTLL3A0A0A6YYG9 625 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 IGHV2OR16-5A0A0B4J2B6 119 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 GOLGA6L7A0A1B0GV03 622 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 C4orf51C9J302 202 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 UPK1AO00322 258 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 TRDMT1O14717 391 aaKnown RBP1.04□□□□□ -2.24
PCM1-217ENST00000522998 LCA5LO95447 670 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 GCGP01275 180 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 IGLV6-57P01721 117 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 SLC35G6P0C7Q6 338 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 RALBP11234 206 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 HRES1P13985 223 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 HLA-DMAP28067 261 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 GABRR2P28476 465 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 CSKP41240 450 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 OR12D2P58182 307 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 SLC35A1P78382 337 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 LCN2P80188 198 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 C2orf54Q08AI8 447 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 BAMBIQ13145 260 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 MAPRE2Q15555 327 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 KLHL40Q2TBA0 621 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 FBXL19-AS1Q494R0 122 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 HIKESHIQ53FT3 197 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 HHATQ5VTY9 493 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 SLC35D2Q76EJ3 337 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 OR2W3Q7Z3T1 314 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 SGPP2Q8IWX5 399 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 SLC7A5P1Q8MH63 180 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 ZCCHC24Q8N2G6 241 aaKnown RBP1.04□□□□□ -2.24
PCM1-217ENST00000522998 ZNF420Q8TAQ5 688 aaPredicted RBP1.04□□□□□ -2.24
PCM1-217ENST00000522998 AGR3Q8TD06 166 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 TMEM234Q8WY98 164 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 PEX13Q92968 403 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 YIPF5Q969M3 257 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 CERS2Q96G23 380 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 TBL1XR1Q9BZK7 514 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 BLZF1Q9H2G9 400 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 NCOR1P1Q9H4R4 102 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 RDH14Q9HBH5 336 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 SND1-IT1Q9HBX3 110 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 FAM60AQ9NP50 221 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 ZNF302Q9NR11 478 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 ZNF492Q9P255 531 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 STX18Q9P2W9 335 aaKnown RBP1.04□□□□□ -2.24
PCM1-217ENST00000522998 RAB22AQ9UL26 194 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 PSME2Q9UL46 239 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 DDX19BQ9UMR2 479 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 PPIL1Q9Y3C6 166 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 KLF12Q9Y4X4 402 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 AK9Q5TCS8 1911 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 ZBED9Q6R2W3 1325 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 SBNO1A3KN83 1393 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 PLEKHG2Q9H7P9 1386 aa1.04□□□□□ -2.24
PCM1-217ENST00000522998 PLXNB3Q9ULL4 1909 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 ICE1Q9Y2F5 2266 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 TRAV8-4A0A0B4J246 113 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 TRAV8-6A0A0B4J262 113 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 A0A0G2JMP0 313 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 A0A0X1KG70 313 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 A0A1W2PRF3 423 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 A0A1W2PRM7 423 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 IZUMO1RA6ND01 250 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 NCF1BA6NI72 391 aaPredicted RBP1.03□□□□□ -2.24
PCM1-217ENST00000522998 NCF1CA8MVU1 366 aaPredicted RBP1.03□□□□□ -2.24
PCM1-217ENST00000522998 DFFAO00273 331 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 CBR3O75828 277 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 P01737 135 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 OR5AC1P0C628 307 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 ZNF35P13682 527 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 PMCHP20382 165 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 TUBG1P23258 451 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 ARL2P36404 184 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 CFHR2P36980 270 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 MTPNP58546 118 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 GRB2P62993 217 aaKnown RBP1.03□□□□□ -2.24
PCM1-217ENST00000522998 HCP5Q6MZN7 132 aa1.03□□□□□ -2.24
PCM1-217ENST00000522998 WDR59Q6PJI9 974 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms