RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 TGFBR3Q03167 851 aa15.96■□□□□ 0.15
TRAPPC9-210ENST00000521667 ARFRP1Q13795 201 aa15.96■□□□□ 0.15
TRAPPC9-210ENST00000521667 CDK10Q15131 360 aa15.96■□□□□ 0.15
TRAPPC9-210ENST00000521667 ZMYND11Q15326 602 aa15.96■□□□□ 0.15
TRAPPC9-210ENST00000521667 SCGB2B2Q4G0G5 96 aa15.96■□□□□ 0.15
TRAPPC9-210ENST00000521667 MDP1Q86V88 176 aa15.96■□□□□ 0.15
TRAPPC9-210ENST00000521667 CD163Q86VB7 1156 aa15.96■□□□□ 0.15
TRAPPC9-210ENST00000521667 Q96M66 194 aa15.96■□□□□ 0.15
TRAPPC9-210ENST00000521667 PECRQ9BY49 303 aa15.96■□□□□ 0.15
TRAPPC9-210ENST00000521667 PTTG3PQ9NZH4 202 aa15.96■□□□□ 0.15
TRAPPC9-210ENST00000521667 BOLA1Q9Y3E2 137 aa15.96■□□□□ 0.15
TRAPPC9-210ENST00000521667 NPTNQ9Y639 398 aa15.96■□□□□ 0.15
TRAPPC9-210ENST00000521667 ZNF850A8MQ14 1090 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 ZNF780AO75290 641 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 NGFP01138 241 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 NAT1P18440 290 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 IGHV1-2P23083 117 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 HRH1P35367 487 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 CBX5P45973 191 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 Q6ZS92 163 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 C9orf106Q8NAJ2 232 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 OR52B4Q8NGK2 314 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 OR13C8Q8NGS7 320 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 ZFAND1Q8TCF1 268 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 SNAPC3Q92966 411 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 HYLS1Q96M11 299 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 OCSTAMPQ9BR26 566 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 ALX4Q9H161 411 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 OPA3Q9H6K4 179 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 TMEM82A0PJX8 343 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 ATP6V1G1O75348 118 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 CXADRP78310 365 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 HLXQ14774 488 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 ACSF3Q4G176 576 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 SPICQ8N5J4 248 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 PXT1Q8NFP0 134 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 OR4K15Q8NH41 348 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 ST8SIA4Q92187 359 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 CYYR1Q96J86 154 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 ZNF75AQ96N20 296 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 PAPOLGQ9BWT3 736 aaKnown RBP15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 ZNF436Q9C0F3 470 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 POFUT1Q9H488 388 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 PLSCR3Q9NRY6 295 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 EIF3KQ9UBQ5 218 aaKnown RBP15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 GPR160Q9UJ42 338 aa15.95■□□□□ 0.14
TRAPPC9-210ENST00000521667 MGAQ8IWI9 3026 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 UBE2QL1A1L167 161 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 FAM172BPA6NC97 362 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 SERPINE3A8MV23 424 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 AHRRA9YTQ3 701 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 GABRR1P24046 479 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 PDZK1IP1Q13113 114 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 Q6ZT83 130 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 CNEP1R1Q8N9A8 125 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 SLC30A7Q8NEW0 376 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 CCDC107Q8WV48 283 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 CHST6Q9GZX3 395 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 RANBP3Q9H6Z4 567 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 IL36GQ9NZH8 169 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 MGAT4CQ9UBM8 478 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 ARHGAP21Q5T5U3 1957 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 CA11O75493 328 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 CNOT4O95628 575 aaKnown RBP15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 PDGFAP04085 211 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 WNT5AP41221 380 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 KIR2DL2P43627 348 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 RTL6Q6ICC9 239 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 OR2A2Q6IF42 318 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 CCDC36Q8IYA8 594 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 CSNK2A3Q8NEV1 391 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 FBXW5Q969U6 566 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 DLL4Q9NR61 685 aa15.94■□□□□ 0.14
TRAPPC9-210ENST00000521667 SPTBN4Q9H254 2564 aa15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 TNRC6AQ8NDV7 1962 aaKnown RBP15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 IGKV1-12A0A0C4DH73 117 aa15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 CST4P01036 141 aa15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 IGKV1D-12P01611 117 aa15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 PMP2P02689 132 aa15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 IFNA6P05013 189 aa15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 EIF2S3P41091 472 aaKnown RBP15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 UBE2NP61088 152 aaKnown RBP15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 PRDX4Q13162 271 aa15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 ACTBL2Q562R1 376 aa15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 ATPAF1Q5TC12 328 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 FTMTQ8N4E7 242 aa15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 OR6K3Q8NGY3 331 aa15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 WBP1Q96G27 269 aa15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 MYOZ1Q9NP98 299 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC9-210ENST00000521667 RGS13O14921 159 aa15.92■□□□□ 0.14
TRAPPC9-210ENST00000521667 PPA1Q15181 289 aa15.92■□□□□ 0.14
TRAPPC9-210ENST00000521667 SF3B4Q15427 424 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRAPPC9-210ENST00000521667 MICBQ29980 383 aa15.92■□□□□ 0.14
TRAPPC9-210ENST00000521667 C4orf46Q504U0 113 aa15.92■□□□□ 0.14
TRAPPC9-210ENST00000521667 NLRC3Q7RTR2 1065 aa15.92■□□□□ 0.14
TRAPPC9-210ENST00000521667 TMED4Q7Z7H5 227 aa15.92■□□□□ 0.14
TRAPPC9-210ENST00000521667 TMEM246Q9BRR3 403 aa15.92■□□□□ 0.14
TRAPPC9-210ENST00000521667 LYZL6O75951 148 aa15.92■□□□□ 0.14
TRAPPC9-210ENST00000521667 TBC1D28Q2M2D7 210 aa15.92■□□□□ 0.14
TRAPPC9-210ENST00000521667 VAX1Q5SQQ9 334 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms