RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 KIR2DS1Q14954 304 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 CEBPEQ15744 281 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 ICAM5Q9UMF0 924 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 ST3GAL6Q9Y274 331 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 A0A1W2PQF6 199 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 CYR61O00622 381 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 SPRY1O43609 319 aaPredicted RBP9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 IL2RAP01589 272 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 IGKV1D-16P01601 117 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 NDUFB7P17568 137 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 ADRA2CP18825 462 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 CHATP28329 748 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 SRPXP78539 464 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 C2orf68Q2NKX9 166 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 MESTQ5EB52 335 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 PLXDC2Q6UX71 529 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 TFAP2EQ6VUC0 442 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR51A2Q8NGJ7 313 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 MALSU1Q96EH3 234 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 CYB5R1Q9UHQ9 305 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 GPR179Q6PRD1 2367 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 RAB19A4D1S5 217 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 A8MXK9 166 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 ALG1L2C9J202 215 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 ST8SIA3O43173 380 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 SPINT2O43291 252 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 FCGR2CP31995 323 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 CD96P40200 585 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 MPLP40238 635 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 TAS2R30P59541 319 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 HBG1P69891 147 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 HBG2P69892 147 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 NANPQ8TBE9 248 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 RAB39BQ96DA2 213 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 NIT2Q9NQR4 276 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 SLC39A9Q9NUM3 307 aa9.65□□□□□ -0.87
PCDHGA1-202ENST00000517417 DOPEY2Q9Y3R5 2298 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 C9orf170A2RU37 121 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 OR6C6A6NF89 314 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 CTLA4P16410 223 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 SOHLH1Q5JUK2 328 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 DGAT2L6Q6ZPD8 337 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 EXD3Q8N9H8 876 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 OR4A16Q8NH70 328 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 ST7LQ8TDW4 575 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 TCEAL7Q9BRU2 100 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 ADAT1Q9BUB4 502 aaKnown RBP9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 DECR2Q9NUI1 292 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 R4GN57 208 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 ACACAQ13085 2346 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 MEX3AA1L020 520 aaKnown RBP9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 EFEMP2O95967 443 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 HOXC4P09017 264 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 NKX2-1P43699 371 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 UBE2KP61086 200 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 BAXQ07812 192 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 SCCPDHQ8NBX0 429 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 OR2V1Q8NHB1 315 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 GPX8Q8TED1 209 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 ZNRF4Q8WWF5 429 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 FAM96BQ9Y3D0 163 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 POLEQ07864 2286 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 ROS1P08922 2347 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 ZNF98A6NK75 572 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 PATE4P0C8F1 98 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 SUMO3P55854 103 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 DSCR4P56555 118 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 INPP5JQ15735 1006 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 ATRAIDQ6UW56 229 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 GVQW1Q8N7I0 195 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 FOXB1Q99853 325 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 C20orf24Q9BUV8 137 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 RTL8AQ9BWD3 113 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 PCED1AQ9H1Q7 454 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 PLEKHF2Q9H8W4 249 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 RHOFQ9HBH0 211 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 SPACA1Q9HBV2 294 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 PPP1R3CQ9UQK1 317 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 DTX4Q9Y2E6 619 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 SCN2AQ99250 2005 aa9.64□□□□□ -0.87
PCDHGA1-202ENST00000517417 CRYAAP02489 173 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 EPHA8P29322 1005 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 NKX6-1P78426 367 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 UBALD1Q8TB05 177 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 SFT2D1Q8WV19 159 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 HPSE2Q8WWQ2 592 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 SARAFQ96BY9 339 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 INTS12Q96CB8 462 aaKnown RBP9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 SARGQ9BW04 601 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 PURGQ9UJV8 347 aaKnown RBP9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 TNFSF18Q9UNG2 199 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 UNC80Q8N2C7 3258 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 RRP8O43159 456 aaKnown RBP9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 SCGB2A1O75556 95 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 GP1BAP07359 652 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 AKR1C3P42330 323 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 FZD5Q13467 585 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 ISXQ2M1V0 245 aa9.63□□□□□ -0.87
PCDHGA1-202ENST00000517417 SSX9Q7RTT3 188 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms