RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DUS4LO95620 317 aaKnown RBP3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 TOMM40O96008 361 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 MMP7P09237 267 aaPredicted RBP3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 CSF3P09919 207 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZSCAN5DPP0CG00 497 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 ERGP11308 486 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 ATF1P18846 271 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 LMO2P25791 158 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 DRD3P35462 400 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 GCLMP48507 274 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 TTPAP49638 278 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 ERFP50548 548 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 TMEM33P57088 247 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 FMODQ06828 376 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 BAXQ07812 192 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 POU6F1Q14863 301 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 QPRTQ15274 297 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 CLEC12BQ2HXU8 276 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 LRRC75BQ2VPJ9 315 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 CDNFQ49AH0 187 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 C1orf100Q5SVJ3 147 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 C9orf66Q5T8R8 295 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 C9orf57Q5W0N0 161 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 TNFAIP8L2Q6P589 184 aaPredicted RBP3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 CXCL17Q6UXB2 119 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 FAM220AQ7Z4H9 259 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 UBALD2Q8IYN6 164 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 TMEM252Q8N6L7 170 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 OR51S1Q8NGJ8 323 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 OR6T1Q8NGN1 323 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 PIFOQ8TCI5 191 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 ASB17Q8WXJ9 295 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 RGP1Q92546 391 aaPredicted RBP3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 DUX3Q96PT4 197 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 SYT15Q9BQS2 421 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 EMC6Q9BV81 110 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 TIPINQ9BVW5 301 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 ARMCX1Q9P291 453 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 DPM3Q9P2X0 92 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 CLCF1Q9UBD9 225 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 VPS29Q9UBQ0 182 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZNF629Q9UEG4 869 aaPredicted RBP3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 FBXO5Q9UKT4 447 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 LSM5Q9Y4Y9 91 aaKnown RBP3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 SLC25A15Q9Y619 301 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 NUP155O75694 1391 aa3.09□□□□□ -1.92
RNU4-60P-201ENST00000517239 CCDC144AA2RUR9 1427 aa3.09□□□□□ -1.92
RNU4-60P-201ENST00000517239 NCOA3Q9Y6Q9 1424 aa3.09□□□□□ -1.92
RNU4-60P-201ENST00000517239 RBFOX3A6NFN3 312 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 TCAPO15273 167 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 HCRTR1O43613 425 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 REM1O75628 298 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 CNMDO75829 334 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 DHFRP00374 187 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 IFNA21P01568 189 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 CST2P09228 141 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 MYL12AP19105 171 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 TCN2P20062 427 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 RAB3BP20337 219 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 CCNE1P24864 410 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 PPOXP50336 477 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 TAS2R46P59540 309 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 HBG1P69891 147 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 HBG2P69892 147 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 PRDX1Q06830 199 aaKnown RBP3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 RSU1Q15404 277 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 TWIST1Q15672 202 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 TOMM34Q15785 309 aaPredicted RBP3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 HIST3H3Q16695 136 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 CEACAM16Q2WEN9 425 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 ACSBG2Q5FVE4 666 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 ZNF506Q5JVG8 444 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 CLEC12AQ5QGZ9 265 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 KCTD16Q68DU8 428 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 TMEM42Q69YG0 159 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 LAMTOR1Q6IAA8 161 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 UGT2A3Q6UWM9 527 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 TEX43Q6ZNM6 134 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 LINC00173Q6ZV60 143 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 CADM2Q8N3J6 435 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 FAM71E2Q8N5Q1 922 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 UBAC2Q8NBM4 344 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR11H7Q8NGC8 314 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR51D1Q8NGF3 324 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR1N2Q8NGR9 330 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 CYGBQ8WWM9 190 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 RDH5Q92781 318 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 HAUS1Q96CS2 278 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 CPNE2Q96FN4 548 aaPredicted RBP3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 C18orf12Q96KH6 178 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR10C1Q96KK4 312 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR5M11Q96RB7 305 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 POLR2J2Q9GZM3 115 aaKnown RBP3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 ZBP1Q9H171 429 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 POLR2J3Q9H1A7 115 aaKnown RBP3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 TPK1Q9H3S4 243 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 SRMSQ9H3Y6 488 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 C11orf49Q9H6J7 331 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 PANK3Q9H999 370 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 RRAGDQ9NQL2 400 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms