RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 ASCL4Q6XD76 172 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 MRPL21Q7Z2W9 205 aaKnown RBP13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 CNEP1R1Q8N9A8 125 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 OR56B2PQ8NGI1 322 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 CYYR1Q96J86 154 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 SEC22CQ9BRL7 303 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 METTL9Q9H1A3 318 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 IFT46Q9NQC8 304 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 PTTG3PQ9NZH4 202 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 SSUH2Q9Y2M2 353 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 PRRC2CQ9Y520 2896 aaKnown RBP13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 SSNA1O43805 119 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 SULT1A3P0DMM9 295 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 SULT1A4P0DMN0 295 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 WNT5AP41221 380 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 NHLH1Q02575 133 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 OR52W1Q6IF63 320 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 Q6ZT83 130 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 ZNF850A8MQ14 1090 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 CNOT4O95628 575 aaKnown RBP13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 PLATP00750 562 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 CPT2P23786 658 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 BLVRBP30043 206 aaPredicted RBP13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 SSTR2P30874 369 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 EIF2S3P41091 472 aaKnown RBP13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 ATP1B3P54709 279 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 P2RX3P56373 397 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 MEF2DQ14814 521 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 FAM209AQ5JX71 171 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 OR2A2Q6IF42 318 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 IDO2Q6ZQW0 420 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 SLC36A1Q7Z2H8 476 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 BPIFB2Q8N4F0 458 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 SLC30A7Q8NEW0 376 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 ZNF431Q8TF32 576 aaPredicted RBP13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 HYLS1Q96M11 299 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 SLC6A7Q99884 636 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 SCNM1Q9BWG6 230 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 POFUT1Q9H488 388 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 DKK4Q9UBT3 224 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 GPR160Q9UJ42 338 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 ANAPC10Q9UM13 185 aa13.33□□□□□ -0.28
THUMPD3-210ENST00000515662 VSIG10L2P0DP72 767 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 OR3A3P47888 321 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 RSU1Q15404 277 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 RNASE10Q5GAN6 216 aaKnown RBP13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 NSUN5P2Q63ZY6 315 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 ZNF585AQ6P3V2 769 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 VWA1Q6PCB0 445 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 OR6K3Q8NGY3 331 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 Q96M66 194 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 MYO7BQ6PIF6 2116 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 CUL9Q8IWT3 2517 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 LYZL6O75951 148 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 HTR3BO95264 441 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 RLN1P04808 185 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 FOXF2Q12947 444 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 PDZK1IP1Q13113 114 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 GABRA6Q16445 453 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 PLEKHN1Q494U1 663 aaPredicted RBP13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 RPUSD3Q6P087 351 aaKnown RBP13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 CCDC36Q8IYA8 594 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 WBP1Q96G27 269 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 SLC25A21Q9BQT8 299 aaPredicted RBP13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 PAPOLGQ9BWT3 736 aaKnown RBP13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 PECRQ9BY49 303 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 GPN1Q9HCN4 374 aaPredicted RBP13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 CRIM1Q9NZV1 1036 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 SCP2D1Q9UJQ7 156 aa13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 URB1O60287 2271 aaKnown RBP13.32□□□□□ -0.28
THUMPD3-210ENST00000515662 IGKV1-12A0A0C4DH73 117 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 SNRPGP15A8MWD9 76 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 DISC1C4P0D8 188 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 TOXO94900 526 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 CST4P01036 141 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 IGKV1D-12P01611 117 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 ZNF14P17017 642 aaPredicted RBP13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 NAT1P18440 290 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 MPZP25189 248 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 UBE2NP61088 152 aaKnown RBP13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 NKPD1Q17RQ9 610 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 SEZ6L2Q6UXD5 910 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 PXT1Q8NFP0 134 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 C17orf50Q8WW18 174 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 ST8SIA4Q92187 359 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 OCSTAMPQ9BR26 566 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 OPA3Q9H6K4 179 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 PTPRZ1P23471 2315 aaPredicted RBP13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 MEIKINA0A087WXM9 373 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 CSTBP04080 98 aaKnown RBP13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 ANXA3P12429 323 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 TBPP20226 339 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 PRDX4Q13162 271 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 ARFRP1Q13795 201 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 ZNF626Q68DY1 528 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 RFPL4BQ6ZWI9 263 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 CD163Q86VB7 1156 aa13.31□□□□□ -0.28
THUMPD3-210ENST00000515662 CSNK2A3Q8NEV1 391 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms