RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 OR5H1A6NKK0 313 aa11.93□□□□□ -0.5
TCOF1-214ENST00000515035 SOX15O60248 233 aa11.93□□□□□ -0.5
TCOF1-214ENST00000515035 IGLV3-25P01717 112 aa11.93□□□□□ -0.5
TCOF1-214ENST00000515035 CCR5P51681 352 aa11.93□□□□□ -0.5
TCOF1-214ENST00000515035 DPTQ07507 201 aa11.93□□□□□ -0.5
TCOF1-214ENST00000515035 TMEM267Q0VDI3 215 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-214ENST00000515035 NKAIN1Q4KMZ8 207 aa11.93□□□□□ -0.5
TCOF1-214ENST00000515035 WDR38Q5JTN6 314 aa11.93□□□□□ -0.5
TCOF1-214ENST00000515035 FAM78BQ5VT40 261 aa11.93□□□□□ -0.5
TCOF1-214ENST00000515035 DHRS11Q6UWP2 260 aa11.93□□□□□ -0.5
TCOF1-214ENST00000515035 CA13Q8N1Q1 262 aa11.93□□□□□ -0.5
TCOF1-214ENST00000515035 CCDC74AQ96AQ1 378 aa11.93□□□□□ -0.5
TCOF1-214ENST00000515035 CHST6Q9GZX3 395 aa11.93□□□□□ -0.5
TCOF1-214ENST00000515035 ANKRD20A5PA0PJZ0 165 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 KRASP01116 189 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 PGFP49763 221 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 INPP5JQ15735 1006 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-214ENST00000515035 EXT1Q16394 746 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 FBXL14Q8N1E6 418 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 ARHGAP5-AS1Q96IT6 56 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 SNX22Q96L94 193 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 FAM24AA6NFZ4 105 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 M0QZK8 103 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 GGCTO75223 188 aaKnown RBP11.92□□□□□ -0.5
TCOF1-214ENST00000515035 OR5AL1P0C617 328 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 HIST1H1DP16402 221 aaKnown RBP11.92□□□□□ -0.5
TCOF1-214ENST00000515035 ERVS71-1P61550 626 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 TMPRSS11FQ6ZWK6 438 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 SPEM1Q8N4L4 309 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 OR2C3Q8N628 320 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 ZNF383Q8NA42 475 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 ROBO4Q8WZ75 1007 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 EXTL1Q92935 676 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 SEC11CQ9BY50 192 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 NTMQ9P121 344 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 C7orf77A4D0Y5 90 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 ZNF737O75373 536 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 FUT3P21217 361 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 THBS4P35443 961 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 C19orf57Q0VDD7 668 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 PNRC1Q12796 327 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-214ENST00000515035 ABI3BPQ7Z7G0 1075 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 SLC26A10Q8NG04 563 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 Q9N2K0 584 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 TMEM9BQ9NQ34 198 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 RBFOX3A6NFN3 312 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 KLRC4-KLRK1H3BQV0 150 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 LIMK1P53667 647 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 TMEM33P57088 247 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 SPCS3P61009 180 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 RPS16P62249 146 aaKnown RBP11.92□□□□□ -0.5
TCOF1-214ENST00000515035 PRDX4Q13162 271 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 VWA2Q5GFL6 755 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 MYPOPQ86VE0 399 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-214ENST00000515035 DEFB108BQ8NET1 73 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 OR10X1Q8NGY0 326 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 BAHD1Q8TBE0 780 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-214ENST00000515035 RAB40CQ96S21 281 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 GSX1Q9H4S2 264 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-214ENST00000515035 V9GYH0 126 aa11.92□□□□□ -0.5
TCOF1-214ENST00000515035 DHHO43323 396 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 IGHA1P01876 353 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 SLC38A11Q08AI6 406 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 ZNF687Q8N1G0 1237 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 C17orf47Q8NEP4 570 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 OR2M7Q8NG81 312 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 OR2T10Q8NGZ9 312 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 C4orf45Q96LM5 186 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 C6orf106Q9H6K1 298 aaPredicted RBP11.91□□□□□ -0.5
TCOF1-214ENST00000515035 A0A096LPE4 126 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 A0A1B0GTQ1 180 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 A0A1W2PPZ6 126 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 ADAM20O43506 726 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 INHBBP09529 407 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 ACSM6Q6P461 480 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 ADIPOR1Q96A54 375 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 NPAS1Q99742 590 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 FAM166BA8MTA8 275 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 IDSB3KWA1 339 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 ACAA1P09110 424 aaPredicted RBP11.91□□□□□ -0.5
TCOF1-214ENST00000515035 FUT6P51993 359 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 SCAND1P57086 179 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 BSXQ3C1V8 233 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 C17orf78Q8N4C9 275 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 OR5M9Q8NGP3 310 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 ACY3Q96HD9 319 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 ST6GAL1P15907 406 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 INSM1Q01101 510 aaPredicted RBP11.91□□□□□ -0.5
TCOF1-214ENST00000515035 MRPS24Q96EL2 167 aaKnown RBP11.91□□□□□ -0.5
TCOF1-214ENST00000515035 DCAF16Q9NXF7 216 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 TIMM9Q9Y5J7 89 aa11.91□□□□□ -0.5
TCOF1-214ENST00000515035 USP54Q70EL1 1684 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 A0A087WUJ7 227 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 IGHA2P01877 340 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 CRISP2P16562 243 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 OR1D5P58170 312 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 TMEM178AQ8NBL3 297 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 PATE1Q8WXA2 126 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 TTC9Q92623 222 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 EGLN1Q9GZT9 426 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms