RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 NRG4Q8WWG1 115 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 AJUBAQ96IF1 538 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 CITED2Q99967 270 aaPredicted RBP11.3□□□□□ -0.6
SPCS3-204ENST00000513139 OPA3Q9H6K4 179 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 MED20Q9H944 212 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 SLC25A19Q9HC21 320 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 PNRC2Q9NPJ4 139 aaKnown RBP11.3□□□□□ -0.6
SPCS3-204ENST00000513139 RPRD1BQ9NQG5 326 aaKnown RBP11.3□□□□□ -0.6
SPCS3-204ENST00000513139 TVP23BQ9NYZ1 205 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 CYB5R1Q9UHQ9 305 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 MEGF11A6BM72 1044 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 FAM183AA6NL82 134 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 RIIAD1A6NNX1 92 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 ZAR1LA6NP61 321 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.29□□□□□ -0.6
SPCS3-204ENST00000513139 M0R135 149 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 DLGAP1O14490 977 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 CASQ2O14958 399 aaPredicted RBP11.29□□□□□ -0.6
SPCS3-204ENST00000513139 CHST1O43916 411 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 ATP6V1G2O95670 118 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 RENP00797 406 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 HMGN1P05114 100 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 CD69Q07108 199 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 SNAI3Q3KNW1 292 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 ZBTB37Q5TC79 503 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 OGFRL1Q5TC84 451 aaPredicted RBP11.29□□□□□ -0.6
SPCS3-204ENST00000513139 SLX4IPQ5VYV7 408 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 LINC00346Q8IVM7 164 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 OR51L1Q8NGJ5 315 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 OR5D13Q8NGL4 314 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 OR9Q1Q8NGQ5 310 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 C17orf50Q8WW18 174 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 H1FXQ92522 213 aaKnown RBP11.29□□□□□ -0.6
SPCS3-204ENST00000513139 RORBQ92753 470 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 SPTSSAQ969W0 71 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 OTULINQ96BN8 352 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 ZNF799Q96GE5 643 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 B9D2Q9BPU9 175 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 CDCA4Q9BXL8 241 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 GABARAPL3Q9BY60 117 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 ZNF702PQ9H963 129 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 CMC2Q9NRP2 79 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 B9D1Q9UPM9 204 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 ORC6Q9Y5N6 252 aa11.29□□□□□ -0.6
SPCS3-204ENST00000513139 STAB2Q8WWQ8 2551 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 PRKYO43930 277 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 DUS4LO95620 317 aaKnown RBP11.28□□□□□ -0.6
SPCS3-204ENST00000513139 IFNGP01579 166 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 GYPBP06028 91 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 CLUP10909 449 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 AMY2BP19961 511 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 OTX1P32242 354 aaPredicted RBP11.28□□□□□ -0.6
SPCS3-204ENST00000513139 PYCR1P32322 319 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 DDOSTP39656 456 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 NAA10P41227 235 aaPredicted RBP11.28□□□□□ -0.6
SPCS3-204ENST00000513139 IKZF1Q13422 519 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 RIPK1Q13546 671 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 SNAPC1Q16533 368 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 STUMQ69YW2 141 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 HCP5Q6MZN7 132 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 WDR82Q6UXN9 313 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 OR8S1Q8NH09 359 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 OR2AE1Q8NHA4 323 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 MED30Q96HR3 178 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 NMNAT2Q9BZQ4 307 aa11.28□□□□□ -0.6
SPCS3-204ENST00000513139 WI2-2373I1.2A0A1W2PRP0 233 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 PAICSP22234 425 aaKnown RBP11.27□□□□□ -0.61
SPCS3-204ENST00000513139 CAV3P56539 151 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 SLC35A2P78381 396 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 COL10A1Q03692 680 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 GLYATL3Q5SZD4 288 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 C12orf73Q69YU5 71 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 PLBD1Q6P4A8 553 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 DRAM2Q6UX65 266 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 DPY19L4Q7Z388 723 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 BCDIN3DQ7Z5W3 292 aaKnown RBP11.27□□□□□ -0.61
SPCS3-204ENST00000513139 WDR86Q86TI4 376 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 ZBTB46Q86UZ6 589 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 CPOQ8IVL8 374 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 TCEANCQ8N8B7 351 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 BBS1Q8NFJ9 593 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 OR1M1Q8NGA1 313 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 OR56B2PQ8NGI1 322 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 PIFOQ8TCI5 191 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 RCC1LQ96I51 464 aaKnown RBP11.27□□□□□ -0.61
SPCS3-204ENST00000513139 IL4I1Q96RQ9 567 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 WNT10AQ9GZT5 417 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 HAO2Q9NYQ3 351 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 ENOPH1Q9UHY7 261 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 KCNG2Q9UJ96 466 aa11.27□□□□□ -0.61
SPCS3-204ENST00000513139 A0A1W2PQ09 198 aa11.26□□□□□ -0.61
SPCS3-204ENST00000513139 NKX6-3A6NJ46 265 aa11.26□□□□□ -0.61
SPCS3-204ENST00000513139 ANKRD30BLA7E2S9 258 aa11.26□□□□□ -0.61
SPCS3-204ENST00000513139 VGLL3A8MV65 326 aa11.26□□□□□ -0.61
SPCS3-204ENST00000513139 E9PQ18 207 aa11.26□□□□□ -0.61
SPCS3-204ENST00000513139 ZNF3P17036 446 aa11.26□□□□□ -0.61
SPCS3-204ENST00000513139 SPI1P17947 270 aa11.26□□□□□ -0.61
SPCS3-204ENST00000513139 SLC25A1P53007 311 aa11.26□□□□□ -0.61
SPCS3-204ENST00000513139 EFNB1P98172 346 aa11.26□□□□□ -0.61
SPCS3-204ENST00000513139 EGFEM1PQ0D2K5 195 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms