RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 MGAM2Q2M2H8 2515 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 IGKV1D-17A0A075B6S4 117 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 OR2AT4A6NND4 320 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 ZNF670-ZNF695F2Z2N8 137 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 LOC110117498-PIK3R3F6TDL0 507 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 SIGLEC5O15389 551 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 DHRS3O75911 302 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 PSG2P11465 335 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 ACTR3P61158 418 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 LRRC10Q5BKY1 277 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 ZNF684Q5T5D7 378 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 VMO1Q7Z5L0 202 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 COMMD2Q86X83 199 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 GID4Q8IVV7 300 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 PDZD9Q8IXQ8 264 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 PIP4P2Q8N4L2 257 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 OR51G2Q8NGK0 314 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 SGMS2Q8NHU3 365 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 ZNF671Q8TAW3 534 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 TMIGD2Q96BF3 282 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 GABARAPL3Q9BY60 117 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 TNFRSF19Q9NS68 423 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 WARS2Q9UGM6 360 aaKnown RBP14.75□□□□□ -0.05
TPM3-220ENST00000509601 ENOPH1Q9UHY7 261 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 ENPP5Q9UJA9 477 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 ZNF222Q9UK12 451 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 SLC22A13Q9Y226 551 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 SNX5Q9Y5X3 404 aa14.75□□□□□ -0.05
TPM3-220ENST00000509601 PKD1L1Q8TDX9 2849 aa14.74□□□□□ -0.05
TPM3-220ENST00000509601 FAM181BA6NEQ2 426 aa14.74□□□□□ -0.05
TPM3-220ENST00000509601 OR5B21A6NL26 309 aa14.74□□□□□ -0.05
TPM3-220ENST00000509601 NRASP01111 189 aa14.74□□□□□ -0.05
TPM3-220ENST00000509601 HTR1FP30939 366 aa14.74□□□□□ -0.05
TPM3-220ENST00000509601 PLCXD3Q63HM9 321 aa14.74□□□□□ -0.05
TPM3-220ENST00000509601 HAGHLQ6PII5 290 aaPredicted RBP14.74□□□□□ -0.05
TPM3-220ENST00000509601 TMEM86BQ8N661 226 aa14.74□□□□□ -0.05
TPM3-220ENST00000509601 TNFRSF14Q92956 283 aa14.74□□□□□ -0.05
TPM3-220ENST00000509601 UBE2FQ969M7 185 aa14.74□□□□□ -0.05
TPM3-220ENST00000509601 EME1Q96AY2 570 aa14.74□□□□□ -0.05
TPM3-220ENST00000509601 TBX5Q99593 518 aa14.74□□□□□ -0.05
TPM3-220ENST00000509601 UNKLQ9H9P5 680 aaKnown RBP14.74□□□□□ -0.05
TPM3-220ENST00000509601 ONECUT1Q9UBC0 465 aa14.74□□□□□ -0.05
TPM3-220ENST00000509601 SLC25A10Q9UBX3 287 aaPredicted RBP14.74□□□□□ -0.05
TPM3-220ENST00000509601 A0A0U1RQK1 487 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 A0A1B0GVI7 797 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 A0A1W2PQL4 384 aaPredicted RBP14.73□□□□□ -0.05
TPM3-220ENST00000509601 A6NIN4 97 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 SAC3D1A6NKF1 404 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 POM121CA8CG34 1229 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 MTRF1O75570 445 aaKnown RBP14.73□□□□□ -0.05
TPM3-220ENST00000509601 OR2T7P0C7T2 308 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 MDKP21741 143 aaPredicted RBP14.73□□□□□ -0.05
TPM3-220ENST00000509601 GABRA2P47869 451 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 DLX1P56177 255 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 CAV3P56539 151 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 IL13RA1P78552 427 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 PRB3Q04118 309 aaPredicted RBP14.73□□□□□ -0.05
TPM3-220ENST00000509601 CLVS2Q5SYC1 327 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 BCL2L15Q5TBC7 163 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 METAP1DQ6UB28 335 aaPredicted RBP14.73□□□□□ -0.05
TPM3-220ENST00000509601 SHISA2Q6UWI4 295 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 KIR3DL3Q8N743 410 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 ZNRF1Q8ND25 227 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 OR8J1Q8NGP2 316 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 OR2T27Q8NH04 317 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 PYDC1Q8WXC3 89 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 ZNF488Q96MN9 340 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 CHIAQ9BZP6 476 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 RIBC2Q9H4K1 309 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 MOB1AQ9H8S9 216 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 GPR173Q9NS66 373 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 GTF2A1LQ9UNN4 478 aa14.73□□□□□ -0.05
TPM3-220ENST00000509601 NKX6-3A6NJ46 265 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 E9PQ18 207 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 RNASEK-C17orf49H0YIS7 233 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 DLGAP1O14490 977 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 SYNGR1O43759 233 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 NOS1APO75052 506 aaPredicted RBP14.72□□□□□ -0.05
TPM3-220ENST00000509601 CIB2O75838 187 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 RPP14O95059 124 aaKnown RBP14.72□□□□□ -0.05
TPM3-220ENST00000509601 APOL3O95236 402 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 CCL1P22362 96 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 OMGP23515 440 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 RELBQ01201 579 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 FIP1L1Q6UN15 594 aaKnown RBP14.72□□□□□ -0.05
TPM3-220ENST00000509601 ACP7Q6ZNF0 438 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 C1orf122Q6ZSJ8 110 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 CATSPERDQ86XM0 798 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 YIPF7Q8N8F6 280 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 H1FXQ92522 213 aaKnown RBP14.72□□□□□ -0.05
TPM3-220ENST00000509601 RNF166Q96A37 237 aaPredicted RBP14.72□□□□□ -0.05
TPM3-220ENST00000509601 SDSLQ96GA7 329 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 RBM4BQ9BQ04 359 aaKnown RBP14.72□□□□□ -0.05
TPM3-220ENST00000509601 SIRT7Q9NRC8 400 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 RASL12Q9NYN1 266 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 MMP24Q9Y5R2 645 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 POMT1Q9Y6A1 747 aa14.72□□□□□ -0.05
TPM3-220ENST00000509601 PQLC2LA1A4F0 135 aa14.71□□□□□ -0.05
TPM3-220ENST00000509601 METTL15A6NJ78 407 aa14.71□□□□□ -0.05
TPM3-220ENST00000509601 H3BNX3 289 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms