RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 NUBPLQ8TB37 319 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 DEDD2Q8WXF8 326 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 SCARF2Q96GP6 870 aaPredicted RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 LRRC3BQ96PB8 259 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 PSMG3Q9BT73 122 aaPredicted RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 TMEM38AQ9H6F2 299 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 SAR1AQ9NR31 198 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 TAS2R7Q9NYW3 318 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 SS18L2Q9UHA2 77 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 NDUFAF1Q9Y375 327 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 IDSB3KWA1 339 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 HLA-DQB2P05538 268 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ICAM2P13598 275 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 C4BPBP20851 252 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 PRDX3P30048 256 aaKnown RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 GDNFP39905 211 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 PMELP40967 661 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CAPZBP47756 277 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 OR10K2Q6IF99 312 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 TMEM144Q7Z5S9 345 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 KCNMB4Q86W47 210 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 OR5AU1Q8NGC0 362 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 TAAR8Q969N4 342 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ROPN1LQ96C74 230 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 COL21A1Q96P44 957 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 OPALINQ96PE5 141 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ADOQ96SZ5 270 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 THAP7Q9BT49 309 aaPredicted RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CXorf21Q9HAI6 301 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CES1P1Q9UKY3 287 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CACNG2Q9Y698 323 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 SULT2B1O00204 365 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 SPAG7O75391 227 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CSN2P05814 226 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 LINC00271P0C7V0 271 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 GABRA3P34903 492 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 GATA4P43694 442 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 AQP5P55064 265 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 EFEMP1Q12805 493 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 MARC1Q5VT66 337 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 C5orf46Q6UWT4 87 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ODF3L1Q8IXM7 274 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 FBXL14Q8N1E6 418 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 DCAF4L2Q8NA75 395 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 OR10Z1Q8NGY1 313 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 BIRC7Q96CA5 298 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 OR5M11Q96RB7 305 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 SEC22CQ9BRL7 303 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 LAT2Q9GZY6 243 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CKLFQ9UBR5 152 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ZCWPW2A0A1B0GU75 182 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 PPP5D1E7EU14 171 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 SLC31A2O15432 143 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 EDF1O60869 148 aaKnown RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 RAMP3O60896 148 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CSN3P07498 182 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 TAC1P20366 129 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 GCSHP23434 173 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 SSTR5P35346 364 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 P2RY1P47900 373 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CR1LQ2VPA4 569 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 HSD17B12Q53GQ0 312 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 PIGGQ5H8A4 983 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF684Q5T5D7 378 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 FAM71E1Q6IPT2 247 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 RNF165Q6ZSG1 346 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 FAM57BQ71RH2 274 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 OLIG3Q7RTU3 272 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 OR1S2Q8NGQ3 325 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 PHLDA1Q8WV24 401 aaPredicted RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 EEF1AKMT1Q8WVE0 214 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 TOMM40LQ969M1 308 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF300Q96RE9 604 aaPredicted RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 TOLLIPQ9H0E2 274 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 PLAC1Q9HBJ0 212 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 SEMA5BQ9P283 1151 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 RSL24D1Q9UHA3 163 aaKnown RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 PPIL1Q9Y3C6 166 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ANKRD20A5PA0PJZ0 165 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 AZIN1O14977 448 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 GFRA3O60609 400 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CTAG2O75638 210 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 IFNA2P01563 188 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 RPS3P23396 243 aaKnown RBP eCLIP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 PSMB6P28072 239 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 HTR6P50406 440 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 RAB5BP61020 215 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 DUSP7Q16829 419 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CEACAM21Q3KPI0 293 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 UNC50Q53HI1 259 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 SIRPB2Q5JXA9 342 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 FBXL22Q6P050 247 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 FAM231DQ6ZW35 169 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 BHLHA15Q7RTS1 189 aaPredicted RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF485Q8NCK3 441 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ADAD2Q8NCV1 583 aaKnown RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ADAMTS16Q8TE57 1224 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 Q96MF0 132 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 GPHA2Q96T91 129 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms