RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 CCL13Q99616 98 aa12.52□□□□□ -0.41
TRIO-211ENST00000508343 NUDT16L1Q9BRJ7 211 aaKnown RBP12.52□□□□□ -0.41
TRIO-211ENST00000508343 ALG8Q9BVK2 526 aa12.52□□□□□ -0.41
TRIO-211ENST00000508343 WDR13Q9H1Z4 485 aa12.52□□□□□ -0.41
TRIO-211ENST00000508343 RASSF4Q9H2L5 321 aa12.52□□□□□ -0.41
TRIO-211ENST00000508343 PLEKHA1Q9HB21 404 aa12.52□□□□□ -0.41
TRIO-211ENST00000508343 FRRS1LQ9P0K9 344 aa12.52□□□□□ -0.41
TRIO-211ENST00000508343 DNAJB11Q9UBS4 358 aa12.52□□□□□ -0.41
TRIO-211ENST00000508343 PQLC2LA1A4F0 135 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 ANKRD61A6NGH8 418 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 RNF212BA8MTL3 300 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 C22orf46C9J442 243 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 H3BSH0 61 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 DVL1O14640 695 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 CASQ2O14958 399 aaPredicted RBP12.51□□□□□ -0.41
TRIO-211ENST00000508343 WBP4O75554 376 aaKnown RBP12.51□□□□□ -0.41
TRIO-211ENST00000508343 HTR1AP08908 422 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 PPIAL4GP0DN37 164 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 GLRA1P23415 457 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 CCR9P51686 369 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 NANOS3P60323 173 aaKnown RBP12.51□□□□□ -0.41
TRIO-211ENST00000508343 ADARB1P78563 741 aaKnown RBP12.51□□□□□ -0.41
TRIO-211ENST00000508343 C11orf91Q3C1V1 193 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 OGFRL1Q5TC84 451 aaPredicted RBP12.51□□□□□ -0.41
TRIO-211ENST00000508343 TMEM244Q5VVB8 128 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 STUMQ69YW2 141 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 HAGHLQ6PII5 290 aaPredicted RBP12.51□□□□□ -0.41
TRIO-211ENST00000508343 SLC36A1Q7Z2H8 476 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 SYS1Q8N2H4 156 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 DHRSXQ8N5I4 330 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 OR5T2Q8NGG2 359 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 OR52I1Q8NGK6 324 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 C10orf35Q96D05 121 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 PELI1Q96FA3 418 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 C4orf36Q96KX1 117 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 DNTTIP1Q9H147 329 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 DCLRE1BQ9H816 532 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 SMURF1Q9HCE7 757 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 ERVK13-1Q9NX77 482 aa12.51□□□□□ -0.41
TRIO-211ENST00000508343 A0A0A6YYJ9 748 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 LOC107986453A0A1B0GWG9 222 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 ENSAO43768 121 aaKnown RBP12.5□□□□□ -0.41
TRIO-211ENST00000508343 CLIC3O95833 236 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 ECDO95905 644 aaPredicted RBP12.5□□□□□ -0.41
TRIO-211ENST00000508343 SERPINA3P01011 423 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 ISG15P05161 165 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 LIPFP07098 398 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 FPR2P25090 351 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 HAAOP46952 286 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 ELF3P78545 371 aaPredicted RBP12.5□□□□□ -0.41
TRIO-211ENST00000508343 SMN1Q16637 294 aaKnown RBP12.5□□□□□ -0.41
TRIO-211ENST00000508343 ARMCX4Q5H9R4 360 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 SETD9Q8NE22 299 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 ZNF418Q8TF45 676 aaPredicted RBP12.5□□□□□ -0.41
TRIO-211ENST00000508343 TMIGD2Q96BF3 282 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 ZNF649Q9BS31 505 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 ISG20L2Q9H9L3 353 aaKnown RBP12.5□□□□□ -0.41
TRIO-211ENST00000508343 FGF20Q9NP95 211 aaPredicted RBP12.5□□□□□ -0.41
TRIO-211ENST00000508343 SNTG1Q9NSN8 517 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 RASL12Q9NYN1 266 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 NLKQ9UBE8 527 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 NUP50Q9UKX7 468 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 SLC7A11Q9UPY5 501 aa12.5□□□□□ -0.41
TRIO-211ENST00000508343 NDUFB3O43676 98 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 FCN3O75636 299 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 GATBO75879 557 aaKnown RBP12.49□□□□□ -0.41
TRIO-211ENST00000508343 AMY2BP19961 511 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 TGM4P49221 684 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 SRSF2Q01130 221 aaKnown RBP12.49□□□□□ -0.41
TRIO-211ENST00000508343 MRPL28Q13084 256 aaKnown RBP12.49□□□□□ -0.41
TRIO-211ENST00000508343 IL18R1Q13478 541 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 ALKBH1Q13686 389 aaKnown RBP12.49□□□□□ -0.41
TRIO-211ENST00000508343 UBE2V2Q15819 145 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 KLF17Q5JT82 389 aaPredicted RBP12.49□□□□□ -0.41
TRIO-211ENST00000508343 USP43Q70EL4 1123 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 BTN2A1Q7KYR7 527 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 FAM216BQ8N7L0 139 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 PNLDC1Q8NA58 520 aaKnown RBP12.49□□□□□ -0.41
TRIO-211ENST00000508343 ANGPTL6Q8NI99 470 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 CNIH3Q8TBE1 160 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 PP6455Q8WZ26 134 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 ST8SIA4Q92187 359 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 UPRTQ96BW1 309 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 MED30Q96HR3 178 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 CHST5Q9GZS9 411 aa12.49□□□□□ -0.41
TRIO-211ENST00000508343 DNHD1Q96M86 4753 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 A0A1B0GW55 424 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 IRGMA1A4Y4 181 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 NKX6-3A6NJ46 265 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 OR4C45A6NMZ5 311 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 OR2AT4A6NND4 320 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 H0YAE9 185 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 J3QT63 122 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 GPR37O15354 613 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 NOS1APO75052 506 aaPredicted RBP12.48□□□□□ -0.41
TRIO-211ENST00000508343 DUX4L2P0CJ85 424 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 DUX4L3P0CJ86 424 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 DUX4L4P0CJ87 422 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 DUX4L5P0CJ88 424 aa12.48□□□□□ -0.41
TRIO-211ENST00000508343 DUX4L6P0CJ89 424 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms